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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25350651, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIKPLSKS SQDLSLLTSD IASFASSIGL ASALPSSGFN DTDFRKPAKS KTQKRKKPKK  60
   61 DQQHKDEDEE GEPKSNIGNE KGKDFGARKQ NKDAPVKQTL QPKPKPGFLS IDDESTGYKK 120
  121 KRFDEFKSLP KLPLVKASLL SSEWYNDAAE FEEKVFGGRK VAVANKEDFK GVVEKKRELG 180
  181 ERLMWQYAED FATSKGKGGD MKMVISAQKS GTVADKITAF EIMVGENPIA NMRSLDALLG 240
  241 MVTSKVGKRF AFKGLKALSE ILIRHIFLTH TMSYGFMLLP DRKLKSLLQR PLNIIPENKD 300
  301 GYSLLLFWYW EDCLKQRYER FVTALDESSK DMLPELKDKA LKTIYFMLTS KSEQERKLLV 360
  361 SLVNKLGDPQ NKSASNADYH LTNLLADHPN MKAVVIDEVD SFLFRPHLGL RAKYHAVNFL 420
  421 SQIRLSHKGE DPKVAKRLID VYFALFKVLT TEANRKQGAD DKGAADKKKS NPKDTKQEVS 480
  481 TDSPIELDSR ILSALLTGVN RAFPYVSTDE ADDIIESQTP VLFKLVHSAN FNVGVQSLML 540
  541 LDKISSKNKI VSDRFYRALY SKLLLPSAMN SSKAEMFIGL LLRAMKNDIN IKRVAAFSKR 600
  601 VLQVALQQPP QYACGCLFLL SEVLKSRPPL WKMVVQRESV EEEEDIEHFE DVIEGDDVDP 660
  661 NKKAENDENV VEVDHDGVEK SSRDGDSSSD DEEALAIRLS DEEDDNASDD SEELIRNETP 720
  721 QLEEVMEVSN DMEKRSQPPM RPSSLPGGYD PRHREPSYCN ADRASWWELG VLSKHAHPSV 780
  781 ATMAGTLLSG TNIVYNGNPL NDLSLTAFLD KFMEKKPKQN TWHGGSQIEP SKKLDMSNRV 840
  841 IGAEILSLAE GDVAPEDLVF HKFYVNKMTS TKQSKKKKKK KLPEEEAAEE LYDVNDGDGG 900
  901 ENYDSDVEFE AGDESDNEEI ENMLDDVDDN AVEEEGGEYD YDDLDGVAGE DDEELVADVS 960
  961 DAEMDTDMDM DLIDDEDDNN VDDDGTGDGG DDDSDGDDGR SKKKKKEKRK RKSPFASLEE1020
 1021 YKHLIDQDEK EDSKTKRKAT SEPTKKKKKK KSKASE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle