YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15228453, gi|...

General Information:
Name(s) found: gi|7801660 [NCBI NR]
gi|15228453 [NCBI NR]
gi|11357786 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|7801660|emb|CAB91581.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15228453|ref|NP_189796.1| AT hook motif-containing protein-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T48965 hypothetical protein F4M19.60 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1752 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKQDSSSP ETNIDSNPSK RTRFQSIETP QSQITHSTTA DTNATVPLTS AFSRVFKDIT  60
   61 NLGYSSVGSF LTPSNNQQSY SAKKTHSTNI GSTVVSGLAS MVQANSRHMK QSQAVVFKDM 120
  121 TNLPSMGLSS ATGKGKASQN ESTTSCMFFH KQTTLQTEKD RFPRKNLQND FENAFHSPIT 180
  181 QGQSSATINN DFHCEMSDDE SMPDFNYDSS STNATDEDQH YYLSPTEDDT DDESTISIPV 240
  241 ADPSSDICQN NANPTEPTTP HIAKCAEHEK FIATLKKTAA KAAANPNLPQ PKKRGRPRLN 300
  301 KDTTNSAETA TKSAYLDHGD ATYKCNYCGA LMWFAERINK KQQNKSPTFT LCCGKGNVKL 360
  361 PLLKDSPALI NNLLTGDDAL SRNFRENIRI YNMIFAMTSL GGRVDNSMPK GKGPNMFRLQ 420
  421 GGNYHLIGSL KPNPGDYAKY SQLYIVDTEN EVDNRATVIN KGKGRRNTPA KQKLKKEVIE 480
  481 ALIEMLNKVN PYVDKFRQAR ERIQDDNDEP FHMRIVADRK GVDRRTYSMP TSSEVAALIP 540
  541 GGFQPSMFDR DIVLEEKTTG HLTRISQIHI SYLALQYPLI LCYGEDGYTP GIEKCLPNSA 600
  601 KKKKKKCISM RQWFAFRIQE RPNECKTLTR SKRLFQQFLC DAYTTIESNR LSYIKFKQSK 660
  661 LRCENYNSLK KASEAGTTSM NEEGNQVLIP SSLTGGPRYM VQNYYDAMAI CKHYGFPDLF 720
  721 ITFTCNPKWP EITRHCQARG LSVDDRPDIV ARIFKIKLDS LMKDLTDGKM LGKTVASMHT 780
  781 VEFQKRGLPH AHILLFMDAK SKLPTADDID KIISAEIPDK DKEPELYEVI KNSMIHGPCG 840
  841 AANMNSPCMV EGKCSKQYPK KHQDITKVGK DGYPIYRRRM TEDYIEKGGF KCDNGYVVPY 900
  901 NKKLSLRYQA HINVEWCNQS GSIKYLFKYI NKGADRVVFI VEPVNQDKTT ENATSGEPPN 960
  961 STEKKKDEIK DWFDCRYVSA SEAVWRIYKF PLQDRSTAVQ RLSFHDEGKQ PVYAKPDADI1020
 1021 EDVLERISNE DSMFMAWLTL NKNNDVGKNG KRARELLYSQ IPAYFTWDGK NKQWVKRIRG1080
 1081 FSLGRINYVC RKMEVEYYLR VLLNIVKGPM SYDDIKTFNG VVYPSFKEAC FARGILDDDQ1140
 1141 VYIDGLHEAS QFCFGDYLRN FFAMLLLSDS LARPEHVWSE TWHLLAEDIE NKKREDFKNP1200
 1201 DLKLTLAEIR NYTLQEIEKI MLRNGATLKE IQDFPQPSRE GIDNSNRLVV DELRYNIDSN1260
 1261 LKEKHDEWFQ MLNTEQRGIY DEITGAVFND LGGVFFIYGF GGTGKTFIWK TLAAAVRSRG1320
 1321 QIVLNVASSG IASLLLEGGR TAHSRFAIPL NPDEFSVCKI TPKSDLANLI KEASLIIWDE1380
 1381 APMMSKFCFE SLDKSFYDIL NNKDNKVFGG KVVVFGGDFR QVLPVINGAG RVEIVMSSLN1440
 1441 ASYLWDHCKV LKLTKNMRLL SGGLSSEEAK EIQQFSDWLL AVGDGRINEP NDGEALIDIP1500
 1501 EELLIKEAGN PIEAISKEIY GDPSELHMIN DPKFFQRRAI LAPTNEDVNT INQYMLEHLK1560
 1561 SEERIYLSAD SIDPTDSDSL ANPVITPDFL NSIQLTGMPH HALRLKVGAP VMLLRNLDPK1620
 1621 GGLCNGTRLQ ITQLAKQVVQ AKVITRDRIG DIVLIPLINL TPSDTKLPFK MRRRQFPLSV1680
 1681 AFAMTINKSQ GQSLEQVGLY LPKPVFSHGQ LYVALSRVTS KKGLKILILD KDGNMQKQTT1740
 1741 NVVFKEVFQN IV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..305] FFAS03 1.37 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
    2 View Details [306..398] deduced N/A No confident structure predictions are available.
    3 View Details [399..596] deduced N/A No confident structure predictions are available.
    4 View Details [597..696] deduced N/A No confident structure predictions are available.
    5 View Details [697..881] MSA 2.099961 View MSA. No confident structure predictions are available.
    6 View Details [882..953] MSA 1.098993 View MSA. No confident structure predictions are available.
    7 View Details [954..1076] deduced N/A No confident structure predictions are available.
    8 View Details [1077..1196] PSI-BLAST 82.69897 Crystal Structure Analysis of ClpB
    9 View Details [1197..1752] PSI-BLAST 30.154902 RecBCD:DNA complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle