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Protein Overview: CAD1_ARATH

General Information:
Name(s) found: CAD1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 561 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: immune response [IMP]
    cell death [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENRKGGNFS VPSSEALTTT LRNAIQALGR GFDVTSDVRL LYCKGAPGSR LVRIEEGQNR  60
   61 DLELSHGFLL PNVPADIDCS RGNSGTQRIS VCSFHEMAEE FNVRSGVKGN IPLGCFNAMF 120
  121 NYTGSWQVDA ASTKSLALVG YFIPLYDVKL AKLTLVLHNE IRRAVPSSWD PASLASFIEN 180
  181 YGTHIVTSVT IGGRDVVYIR QHQSSPLPVS EIENYVNDMI KHRFHEAESQ SITGPLKYKD 240
  241 KDITVIFRRR GGDDLEQSHA RWAETVPAAP DIINMTFTPI VSLLEGVPGL RHLTRAIELY 300
  301 LEYKPPIEDL QYFLDYQIAR AWAPEQSNLQ RKEPVCSSLQ FSLMGPKLFI SADQVTVGRK 360
  361 PVTGLRLSLE GSKQNRLSIH LQHLVSLPKI LQPHWDSHVP IGAPKWQGPE EQDSRWFEPI 420
  421 KWKNFSHVST SPIEHTETHI GDLSGVHIVT GAQLGVWDFG SKNVLHLKLL FSKVPGCTIR 480
  481 RSVWDHTPVA SSGRLEPGGP STSSSTEEVS GQSGKLAKIV DSSEMLKGPQ DLPGHWLVTG 540
  541 AKLGVEKGKI VLRVKYSLLN Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 43.221849 No description for 2qqhA was found.
    2 View Details [329..495] MSA 1.089938 View MSA. No confident structure predictions are available.
    3 View Details [496..561] MSA 1.014988 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle