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Protein Overview: PP222_ARATH

General Information:
Name(s) found: PP222_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana GN=HCF152 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 778 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    Biological Process: mRNA processing [IMP]
    Molecular Function: mRNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILRPPTSS SSSSFPPYPK PVSLTPPVSF TLIHNPINLC SINPPFTNAG RPIFQRSASG  60
   61 TANSSAEDLS SFLGSPSEAY STHNDQELLF LLRNRKTDEA WAKYVQSTHL PGPTCLSRLV 120
  121 SQLSYQSKPE SLTRAQSILT RLRNERQLHR LDANSLGLLA MAAAKSGQTL YAVSVIKSMI 180
  181 RSGYLPHVKA WTAAVASLSA SGDDGPEESI KLFIAITRRV KRFGDQSLVG QSRPDTAAFN 240
  241 AVLNACANLG DTDKYWKLFE EMSEWDCEPD VLTYNVMIKL CARVGRKELI VFVLERIIDK 300
  301 GIKVCMTTMH SLVAAYVGFG DLRTAERIVQ AMREKRRDLC KVLRECNAED LKEKEEEEAE 360
  361 DDEDAFEDDE DSGYSARDEV SEEGVVDVFK KLLPNSVDPS GEPPLLPKVF APDSRIYTTL 420
  421 MKGYMKNGRV ADTARMLEAM RRQDDRNSHP DEVTYTTVVS AFVNAGLMDR ARQVLAEMAR 480
  481 MGVPANRITY NVLLKGYCKQ LQIDRAEDLL REMTEDAGIE PDVVSYNIII DGCILIDDSA 540
  541 GALAFFNEMR TRGIAPTKIS YTTLMKAFAM SGQPKLANRV FDEMMNDPRV KVDLIAWNML 600
  601 VEGYCRLGLI EDAQRVVSRM KENGFYPNVA TYGSLANGVS QARKPGDALL LWKEIKERCA 660
  661 VKKKEAPSDS SSDPAPPMLK PDEGLLDTLA DICVRAAFFK KALEIIACME ENGIPPNKTK 720
  721 YKKIYVEMHS RMFTSKHASQ ARIDRRVERK RAAEAFKFWL GLPNSYYGSE WKLGPRED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..778] PSI-BLAST 12.045757 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle