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Protein Overview: gi|7267285, gi|1...

General Information:
Name(s) found: gi|7267285 [NCBI NR]
gi|25407324 [NCBI NR]
gi|15234692 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|7267285|emb|CAB81067.1| putative protein (ubiquitin like) [Arabidopsis thaliana] [NCBI NR]
  • pir||A85066 hypothetical protein AT4g05250 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15234692|ref|NP_192434.1| ubiquitin family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein modification process [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVFFETQSG DKFEIELGYW DTMLEIKEKI EKYQCIPVSK QTLIFQGVVL QDHLDIKQCV  60
   61 ILNHSHIQIF VEPNPNPNPN NAQVLQTDIS SPLNSFIDID NFLDSPVSTS VKFGINNDDH 120
  121 VLQPEKSTPF NSSKEIDYFQ EYPISTSMEL VSNNSDQVPQ PEKSTPFNSY EEIDYIQDYP 180
  181 VSTSMELVSN NSDQVPPPEK SPPLNSSKEI DYFQEYPVST SMELVSNNID QVPQPEKSPP 240
  241 LNSSKEIDYF QEYPVSTSME LVSNNNDQVP QPEKSPLLNS FKDIANTQGP SVKRIKLGGI 300
  301 NNSHQDSTMR VNDLSTLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..318] PSI-BLAST 33.522879 Structure of the DNA repair protein hHR23a


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle