YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15233756, gi|...

General Information:
Name(s) found: gi|7267558 [NCBI NR]
gi|25372860 [NCBI NR]
gi|15233756 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|7267558|emb|CAB78039.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G85092 hypothetical protein AT4g09150 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15233756|ref|NP_192654.1| T-complex protein 11 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1097 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: phosphopantetheine binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEPERLGGI SLSFPVNEED TVTTTSPKTL PRRLRRRLLE PKSPVSAAEI DSKLREADLR  60
   61 RQQYYESLSS KARPKMRSPR SGSIEELSQR LESKLNAAEQ KRLSILEKEL ARLAKMDEAR 120
  121 QAAKNGLEQR VEKERDELES KVEERVLKAE KNRMLLFKAM AQRRAAKRQR AAQSLMKKAI 180
  181 QETRYKESVR AAIYQKRAAA ESKRMGILEA ERRRANARLT RVFGAASSVR SQKEAERRKM 240
  241 KDRLEERLQR AKKLKAQYMR RRRGMDSCSS SRSETMRKNQ VHLVRMLVRC WRRFAKYKKS 300
  301 TFVLARAYHE LGINEKSIES VPFEQFAIQM NSVSVIQTVK ALLDRLEIRL TLSKASNVEN 360
  361 INHLLKHIFP PVRRGKSPSP MSKGEQNSPN SKMGYQKLKK IARYPARIFL CAYMIKQHPG 420
  421 AIFRGRGEHE IALVESATCL IREFELLVKV ILEGPESTLP GNVSFVAQRP KKFRSQLEAF 480
  481 DKAWCSYLEG FVVWKINDAK LLEKDLARTQ ESELSEVSKH TSSPKIIDSG LNQKTVKASS 540
  541 PTNRALFSET DGARESKAPA DSHLPSSSSP SPGSSNLSPS LNSGSEAIST PNVVANSFDA 600
  601 ALASENEVIV NEIVHDNSSS FADSLDPNTG DTSNLQVRVK ETMEKAFWDG VMESMKQSQP 660
  661 DFSWVIKLMK EVRDELCEIS PKDWRQEIVQ TIDTDVLSQL LASGNVDMGY LGNILEFSLG 720
  721 ILLKLSAPAN EEEIRVTHHK LMTELGEIVP TDGHSNSSYA VLMVKGLRFV LQQIQILKKE 780
  781 ISKSRLKLLE PLLKGPAGLE YLKKSFSSRH GSPDQASSSL PLTKRWLLSV RGEAEREWKE 840
  841 HKDALSAVIN NHSGSSGLPS TTMRTGGNVS SVSKVNTPSS PFPGIELSEC KGETVDLLVR 900
  901 IGLLKMVSEI GGLTLETVPE TFQLNLSRLR DVQSQIQKIT LVSISVLILQ QTLVSENSSS 960
  961 IDMEAITRTC INRLYEMLDA KPDAGLSEIM ETLSELLDSN DAETKKQVIA NMLVKSLQAG1020
 1021 DAVFTHVSQT IYLAIRAAVL AGNNTKRKQL VETMLRKIGA ASLSDKVIEV SDILVLVATV1080
 1081 SRSVHGLWYE ELLKKPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] PSI-BLAST 22.30103 Heavy meromyosin subfragment
    2 View Details [313..519] PSI-BLAST 4.522879 Tropomyosin
    3 View Details [520..625] deduced N/A No confident structure predictions are available.
    4 View Details [626..810] MSA 1.033983 View MSA. No confident structure predictions are available.
    5 View Details [811..996] deduced N/A No confident structure predictions are available.
    6 View Details [997..1097] MSA 1.028977 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle