| Protein: | gi|15233756, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1097 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15233756, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
539.0 | [0..47] | [1093..56] |
|
Region A: Residues: [1-312] |
1 11 21 31 41 51
| | | | | |
1 MTEPERLGGI SLSFPVNEED TVTTTSPKTL PRRLRRRLLE PKSPVSAAEI DSKLREADLR 60
61 RQQYYESLSS KARPKMRSPR SGSIEELSQR LESKLNAAEQ KRLSILEKEL ARLAKMDEAR 120
121 QAAKNGLEQR VEKERDELES KVEERVLKAE KNRMLLFKAM AQRRAAKRQR AAQSLMKKAI 180
181 QETRYKESVR AAIYQKRAAA ESKRMGILEA ERRRANARLT RVFGAASSVR SQKEAERRKM 240
241 KDRLEERLQR AKKLKAQYMR RRRGMDSCSS SRSETMRKNQ VHLVRMLVRC WRRFAKYKKS 300
301 TFVLARAYHE LG
|
| Detection Method: |  |
| Confidence: | 22.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [313-519] |
1 11 21 31 41 51
| | | | | |
1 INEKSIESVP FEQFAIQMNS VSVIQTVKAL LDRLEIRLTL SKASNVENIN HLLKHIFPPV 60
61 RRGKSPSPMS KGEQNSPNSK MGYQKLKKIA RYPARIFLCA YMIKQHPGAI FRGRGEHEIA 120
121 LVESATCLIR EFELLVKVIL EGPESTLPGN VSFVAQRPKK FRSQLEAFDK AWCSYLEGFV 180
181 VWKINDAKLL EKDLARTQES ELSEVSK
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [520-625] |
1 11 21 31 41 51
| | | | | |
1 HTSSPKIIDS GLNQKTVKAS SPTNRALFSE TDGARESKAP ADSHLPSSSS PSPGSSNLSP 60
61 SLNSGSEAIS TPNVVANSFD AALASENEVI VNEIVHDNSS SFADSL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [626-810] |
1 11 21 31 41 51
| | | | | |
1 DPNTGDTSNL QVRVKETMEK AFWDGVMESM KQSQPDFSWV IKLMKEVRDE LCEISPKDWR 60
61 QEIVQTIDTD VLSQLLASGN VDMGYLGNIL EFSLGILLKL SAPANEEEIR VTHHKLMTEL 120
121 GEIVPTDGHS NSSYAVLMVK GLRFVLQQIQ ILKKEISKSR LKLLEPLLKG PAGLEYLKKS 180
181 FSSRH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [811-996] |
1 11 21 31 41 51
| | | | | |
1 GSPDQASSSL PLTKRWLLSV RGEAEREWKE HKDALSAVIN NHSGSSGLPS TTMRTGGNVS 60
61 SVSKVNTPSS PFPGIELSEC KGETVDLLVR IGLLKMVSEI GGLTLETVPE TFQLNLSRLR 120
121 DVQSQIQKIT LVSISVLILQ QTLVSENSSS IDMEAITRTC INRLYEMLDA KPDAGLSEIM 180
181 ETLSEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [997-1097] |
1 11 21 31 41 51
| | | | | |
1 LDSNDAETKK QVIANMLVKS LQAGDAVFTH VSQTIYLAIR AAVLAGNNTK RKQLVETMLR 60
61 KIGAASLSDK VIEVSDILVL VATVSRSVHG LWYEELLKKP N
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
