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Protein Overview: gi|6706417, gi|1...

General Information:
Name(s) found: gi|6706417 [NCBI NR]
gi|15230308 [NCBI NR]
gi|11358424 [NCBI NR]
Description(s) found:
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  • gi|6706417|emb|CAB66103.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230308|ref|NP_191305.1| catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T46182 hypothetical protein T8H10.60 - Arabidopsis thaliana [NCBI NR]
  • (Q9SCM6) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11358424|pir||T46182 hypothetical protein T8H10.60 - Arabidopsis thalianagi|15230308|ref|NP_191305.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | chr3:21274063-21276774 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | catalytics;metal ion binding | chr3:21263086-21265797 REVERSE LENGTH=356 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding protein OS=Arabidopsis thaliana GN=T8H10.60 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 356 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: proteolysis [IEA]
    Molecular Function: zinc ion binding [IEA]
    catalytic activity [IEA]
    metal ion binding [IEA]
    metalloendopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIENAAAAS GECGVILKAR TDKREYRRIV LKNSLEVLVK AVPIKQGHNL TVSWPVTPSI  60
   61 HHYEEAHARW ATGLYAGEPD WTVEYSFFNV SINLTDACHE HMKDILGLLF RQIKLLQQSG 120
  121 VSQWIFDELS AIFEAEFHYQ AKIDPISYAV NISSNMTNLL GIKYEGQTDK VEPWYNTAEK 180
  181 IIKFTIQMDF NCPLAVSSPA TVVLSNSSVW LLVDYLNEYA YYAQAARLHY GLSLSDNGFE 240
  241 LSLTGFNHKL RILLEAVIQK MANFQVKPDR FSVVKVTVLR ELKKEELINF FDEYTKVGAP 300
  301 KRKSLSVCVY GNQHLKEMSS DKDKVVSTSI EIEDIVGFRN SQPLYASLKG CSQLKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..356] PSI-BLAST 95.39794 No description for 2jg4A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle