Protein Overview: R15A4_ARATH

General Information:
Name(s) found:	R15A4_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|7798992\|emb\|CAB90931.1\| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] [NCBI NR] gi\|75311660\|sp\|Q9LX88.3\|R15A4_ARATH RecName: Full=40S ribosomal protein S15a-4 [NCBI NR] gi\|20259193\|gb\|AAM14312.1\| putative cytoplasmic ribosomal protein S15a [Arabidopsis thaliana] [NCBI NR] gi\|15231316\|ref\|NP_190190.1\| RPS15AD (ribosomal protein S15A D); structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR] gi\|15027961\|gb\|AAK76511.1\| putative cytoplasmic ribosomal protein S15a [Arabidopsis thaliana] [NCBI NR] pir\|\|T49245 cytoplasmic ribosomal protein S15a-like - Arabidopsis thaliana [NCBI NR] 40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3 [Swiss-Prot] (Q9LX88) Cytoplasmic ribosomal protein S15a-like [athaliana3702.FASTAC.txt] putative cytoplasmic ribosomal protein S15a [Arabidopsis thaliana]gi\|15027961\|gb\|AAK76511.1\| putative cytoplasmic ribosomal protein S15a [Arabidopsis thaliana]gi\|7798992\|emb\|CAB90931.1\| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana]gi\|1 [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Regulated by TCP20 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: RPS15AD \| RPS15AD (ribosomal protein S15A D); structural constituent of ribosome \| chr3:16925876-16926514 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] 40S ribosomal protein S15a-4 [nr-271106-contam.fasta] structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta] cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] [nr-271106-contam.fasta] putative cytoplasmic ribosomal protein S15a [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: RPS15AD \| ribosomal protein S15A D \| chr3:16914891-16915529 FORWARD LENGTH=130 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	130 amino acids
Gene Ontology:
Cellular Component:	cytosolic ribosome [IDA] cytosolic small ribosomal subunit [IDA][ISS]
Biological Process:	translation [ISS]
Molecular Function:	structural constituent of ribosome [ISS]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MVRISVLNDG LKSMYNAEKR GKRQVMIRPS SKVIIKFLIV MQKHGYIGEF EYVDDHRSGK 60 61 IVVELNGRLN KCGVISPRFD VGVKEIEGWT ARLLPSRQFG FIVLTTSAGI MDHEEARRKN 120 121 VGGKVLGFFY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..130]	PSI-BLAST	46.221849	Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle