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Protein Overview: gi|15234758, gi|...

General Information:
Name(s) found: gi|7268343 [NCBI NR]
gi|5302784 [NCBI NR]
gi|25407539 [NCBI NR]
gi|15234758 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|7268343|emb|CAB78637.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5302784|emb|CAB46033.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G85176 hypothetical protein AT4g15950 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15234758|ref|NP_193330.1| NRPD4 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    DNA-directed RNA polymerase IV complex [IPI]
    DNA-directed RNA polymerase V complex [IPI]
    Biological Process: DNA methylation on cytosine within a CHH sequence [IMP]
    production of siRNA involved in RNA interference [IGI]
    RNA interference [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKGGKGLK SSLKSKDGGK DGSSTKLKKG TPPANYKILN VSSDQQPFQS SAAKCGKSDK  60
   61 PTKSSKNSLH SFELKDLMTE HWLMLRVVFT TQTLNLSEKS LSILLAVLRL HWIRFVSHSM 120
  121 CVIANASSES VDEVLAFIPS LKVRPLELPE SDSDVCVVIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle