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Protein Overview: gi|15231416, gi|...

General Information:
Name(s) found: gi|15231416 [NCBI NR]
gi|14532856 [NCBI NR]
gi|13430584 [NCBI NR]
gi|11994365 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|15231416|ref|NP_188010.1| DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] [NCBI NR]
  • gi|14532856|gb|AAK64110.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13430584|gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994365|dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: transcription [IEA]
    Molecular Function: DNA binding [IEA]
    DNA-directed RNA polymerase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGEEKNDYR NEEEDFNTPQ QLQKKQRKGK KIATETEDEN EEDKRVTLKV TQVAERPDRI  60
   61 SPIVAYFSTG YDPCKVDPKT GKRVHETPKV TVYKHKDDSK KRIQVVVSPP GARVEFVGTN 120
  121 YTGEQAAMQT NTYRVGVFNR EAKTLRILPV AHNKIIRLEP RVKAQETNEE EASGSAVVKE 180
  181 LEELKTGERD RYNTKKAVTR DKKKRALYMG DDAATQKVLD GKLSELGVNT AALEGTSSTV 240
  241 ARNIPPYNTA ATTANEAYPL EKIIEKGDWS FLEDIYWLLQ QETEAATEAY PVFVRNRLYR 300
  301 LRDIKDDMKK QTVCGAATLL THLVKFKDRN SMNGYDSAKD HKMPDIFRQK FNSMFKDSES 360
  361 DRIPVDKINL LISYVLVLSL HVDNFMTDPE DIAKDLRIST VELRKHFLQL GCKFLKQNST 420
  421 TVATLPTPLN FPEVNRRRRA RK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] MSA 1.036984 View MSA. No confident structure predictions are available.
    2 View Details [166..303] MSA 1.040983 View MSA. No confident structure predictions are available.
    3 View Details [304..442] MSA 1.040969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle