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Protein Overview: gi|15219405, gi|...

General Information:
Name(s) found: gi|25406258 [NCBI NR]
gi|15219405 [NCBI NR]
gi|12324321 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||A96758 hypothetical protein T18K17.13 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219405|ref|NP_177463.1| phosphoinositide binding [Arabidopsis thaliana] [NCBI NR]
  • gi|12324321|gb|AAG52130.1|AC010556_12 hypothetical protein; 41134-44253 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 779 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    Biological Process: signal transduction [ISS]
    Molecular Function: phosphoinositide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFTGFAFV FGILLGILAI VTAEVVGFLY LLKRLNRKRD RQESNSSSDP NFKSFDPRQS  60
   61 IDFSLNKQGV IWILELDENV KDWMKEKLPK EQKKKRVDLL EVHPVRRFAR IKDHKLILSD 120
  121 SLDGPQTPIT LKGCFVDAVS GSGPTRKWAK RFPIQVESKT SVLYKGNRVF YIFLETSWEK 180
  181 ESWCKALRLA ACENQERFIW STKLKEDFRN YLASLNAAYP SFMKPSAGFS FESLDKGLKA 240
  241 DGPSSKVRLI WKKFSKKCST KVNFPPSIRD DKKTSSRSYQ DSQSTGSSGK STSARRMQDN 300
  301 IPEETDVQVI SRSWSHSSHA SDVDSEDKSF DEGTLALNVV LSRLFFDVKQ NTVLKNLVRE 360
  361 RIQRIMSNMR IPSYIGELIC CDVDIGNLPP YIHGTRILPM EMNGVWAFEI DIEYTGGAGL 420
  421 EVETRVDARE EDLQKGIAEG KLQPNSAGDV PPDLLEGLAD FEKQLNVPGG TVDAQDVKSG 480
  481 GTDKADESKG PKGTKTGSSN GSKWKSMLKN IVEQVSQVPI TLSIGVSSLR GTLCVHMKPP 540
  541 PSDQLWFGFT SMPDIEFNLV SSVGEHKITN SHVAMFLVNR FKTAIRDVMV LPNCESVTIP 600
  601 WMTAEKDDWV ERNVAPFMWL NQDSTSDREN LEAAEAKSKA DKPPTSEQMQ KTVNIPQKPR 660
  661 IEEESVSADT APSANSIALL VESDKSLEEL KTPLLESSEK HDTIARGGSA GDIIPGIGQS 720
  721 PSMSTVSGEE DDSNSKGKKM GAAKARMFDF RKKVGEKFEE KKRHVEEKSR QIVEKMRGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] FFAS03 1.01 Dynamin
    2 View Details [242..303] deduced N/A No confident structure predictions are available.
    3 View Details [304..464] MSA 9.102996 View MSA. No confident structure predictions are available.
    4 View Details [465..600] MSA 2.086993 View MSA. No confident structure predictions are available.
    5 View Details [601..779] FFAS03 1.25 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.46923761062082 bayes_pls_golite062009
  • protein binding
    		•  0.127111860178639 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle