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Protein Overview: ATG5_ARATH

General Information:
Name(s) found: ATG5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75170235|sp|Q9FFI2.1|ATG5_ARATH RecName: Full=Autophagy protein 5; AltName: Full=Protein autophagy 5; Short=AtAPG5 [NCBI NR]
  • gi|28827578|gb|AAO50633.1| putative APG5 (autophagy 5) protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26450228|dbj|BAC42232.1| APG5 (autophagy 5) like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237945|ref|NP_197231.1| APG5 (AUTOPHAGY 5); transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|10177074|dbj|BAB10516.1| APG5 (autophagy 5)-like protein [Arabidopsis thaliana] [NCBI NR]
  • Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1 [Swiss-Prot]
  • (Q9FFI2) APG5 (Autophagy 5)-like protein [athaliana3702.FASTAC.txt]
  • APG5 (autophagy 5) like protein [Arabidopsis thaliana]gi|28827578|gb|AAO50633.1| putative APG5 (autophagy 5) protein [Arabidopsis thaliana]gi|10177074|dbj|BAB10516.1| APG5 (autophagy 5)-like protein [Arabidopsis thaliana]gi|15237945|ref|NP_197231.1| au [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Autophagy protein ATG5 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATG5, APG5 | APG5/ATG5 (AUTOPHAGY 5); transporter | chr5:5687162-5689823 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • APG5 (autophagy 5)-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative APG5 (autophagy 5) protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • APG5 (autophagy 5) like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Autophagy protein 5 [nr-271106-contam.fasta]
  • | Symbols: ATG5, APG5, ATATG5 | autophagy protein Apg5 family | chr5:5687160-5689821 REVERSE LENGTH=337 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: autophagy [IMP][ISS]
    senescence [IMP]
    response to starvation [IMP]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEAVKYVW EGAIPLQIHL HKSDVASHPA PPPALVLAPR IGYLPLLIPL IKPYFKDSLP  60
   61 PGEDSIWFDY KGFPLKWYIP TGVLFDLLCA EPERPWNLTI HFRGYPCNIL IPCEGEDSVK 120
  121 WNFVNSLKEA QYIINGNCKN VMNMSQSDQE DLWTSVMNGD LDAYTRLSPK LKMGTVEDEF 180
  181 SRKTSLSSPQ SQQVVPETEV AGQVKTARIP VRLYVRSLNK DFENLEDVPE IDTWDDISYL 240
  241 NRPVEFLKEE GKCFTLRDAI KSLLPEFMGD RAQTSGEERS IDDTEEADGS REMGEIKLVR 300
  301 IQGIEMKLEI PFSWVVNNLM NPEFYLHISV LVKAPQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..337] PSI-BLAST 45.39794 No description for 2dymA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle