YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15229201, gi|...

General Information:
Name(s) found: gi|6223642 [NCBI NR]
gi|42572241 [NCBI NR]
gi|42572239 [NCBI NR]
gi|29028942 [NCBI NR]
gi|26450645 [NCBI NR]
gi|15229201 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|6223642|gb|AAF05856.1|AC011698_7 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42572241|ref|NP_974215.1| binding [Arabidopsis thaliana] [NCBI NR]
  • gi|42572239|ref|NP_974214.1| binding [Arabidopsis thaliana] [NCBI NR]
  • gi|29028942|gb|AAO64850.1| At3g03970 [Arabidopsis thaliana] [NCBI NR]
  • gi|26450645|dbj|BAC42434.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229201|ref|NP_187047.1| binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: spliceosome assembly [IEA]
    nuclear mRNA splicing, via spliceosome [IEA]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRNLGSAFR QELANLDKDP DSHKTAMSNL RSIVKDLDAK VVHVFVAQLS DVKEIGLESG  60
   61 GYTVSLFEDL ARAHGVKIAP HIDIIMPAII RTLSSSEGSL RVQQACSRAV AAMARYGIDP 120
  121 TTPEDKKTNV IHSLCKPLSD SLIDSQHQQH LALGSALCLK SLVDCDNWRS ASSEMVNNVC 180
  181 QSLAVALEAT SSEAKSHMAL VMALSKHNPF TVEAYARLFV KSGLRILDLG VVEGDSQKRL 240
  241 LAIQMLNFLM KNLNPKSISS ELELIYQEME KYQKDQHYVK MAAHETMRQA ERLICEADPM 300
  301 FDAENCKPRN SLSGSVKSTS SLREHDGSVY SRQDRSYVND QDEYDVLFSG VASGRTLVSG 360
  361 SPLVTFGDNN QETGFVIESP RIGDQIQCSG VENGNIESVW FHQRNRSSEF NESVCSRTNR 420
  421 SRSSRRNTKK RQSGDICSKH HRHGFAQDPF TELLDNRQQL LQYSETSSSS SIYDTSGTTT 480
  481 PTNTTEDICE KPKTDLDSEA KLKTVETELD PRLGRSKGVL KLGLSVFSIA VAGFASFMWM 540
  541 YLQDDMMPPH LVPT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 59.39794 No description for 2pkgA was found.
    2 View Details [298..479] MSA 1.159981 View MSA. No confident structure predictions are available.
    3 View Details [480..554] MSA 1.023982 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle