YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|110743600, gi...

General Information:
Name(s) found: gi|30102678 [NCBI NR]
gi|15237941 [NCBI NR]
gi|110743600 [NCBI NR]
gi|10177895 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|30102678|gb|AAP21257.1| At5g24340 [Arabidopsis thaliana] [NCBI NR]
  • gi|15237941|ref|NP_197822.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110743600|dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177895|dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [IEA]
    Molecular Function: nucleic acid binding [IEA][ISS]
    3'-5' exonuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METNLKIYLV SSTDSSEFTH LKWSFTRSTI IALDAEWKPQ HSNTSSFPTV TLLQVACRLS  60
   61 HATDVSDVFL IDLSSIHLPS VWELLNDMFV SPDVLKLGFR FKQDLVYLSS TFTQHGCEGG 120
  121 FQEVKQYLDI TSIYNYLQHK RFGRKAPKDI KSLAAICKEM LDISLSKELQ CSDWSYRPLT 180
  181 EEQKLYAATD AHCLLQIFDV FEAHLVEGIT VQDLRVINVG LQEILTESDY SSKIVTVKLC 240
  241 KATDVIRSMS ENGQNIANGV VPRKTTLNTM PMDENLLKIV RKFGERILLK ESDLLPKKLK 300
  301 KKTRRRVASS TMNTNKQLVC SADWQGPPPW DSSLGGDGCP KFLLDVMVEG LAKHLRCVGI 360
  361 DAAIPHSKKP DSRELLDQAF KENRVLLTRD TKLLRHQDLA KHQIYRVKSL LKNEQLLEVI 420
  421 ETFQLKISGN QLMSRCTKCN GKFIQKPLSI EEAIEAAKGF QRIPNCLFNK NLEFWQCMNC 480
  481 HQLYWEGTQY HNAVQKFMEV CKLSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..505] PSI-BLAST 92.39794 STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle