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Protein Overview: gi|29165401, gi|...

General Information:
Name(s) found: gi|8885580 [NCBI NR]
gi|29165401 [NCBI NR]
gi|220962028 [NCBI NR]
gi|220962003 [NCBI NR]
gi|220961994 [NCBI NR]
gi|220961985 [NCBI NR]
gi|15238340 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|8885580|dbj|BAA97510.1| MADS box transcription factor-like [Arabidopsis thaliana] [NCBI NR]
  • gi|29165401|gb|AAO65310.1| MADS affecting flowering 3 variant I [Arabidopsis thaliana] [NCBI NR]
  • gi|220962028|gb|ACL93443.1| MAF3 [Arabidopsis thaliana] [NCBI NR]
  • gi|220962003|gb|ACL93423.1| MAF3 [Arabidopsis thaliana] [NCBI NR]
  • gi|220961994|gb|ACL93416.1| MAF3 [Arabidopsis thaliana] [NCBI NR]
  • gi|220961985|gb|ACL93409.1| MAF3 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238340|ref|NP_201311.1| MAF3 (MADS AFFECTING FLOWERING 3); transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    negative regulation of flower development [IMP]
    vernalization response [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRKVEIKR IENKSSRQVT FSKRRKGLIE KARQLSILCE SSIAVVAVSG SGKLYDSASG  60
   61 DNMSKIIDRY EIHHADELKA LDLAEKIRNY LPHKELLEIV QSKLEESNVD NVSVDSLISM 120
  121 EEQLETALSV IRAKKTELMM EDMKSLQERE KLLIEENQIL ASQVGKKTFL VIEGDRGMSR 180
  181 ENGSGNKVPE TLSLLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] PSI-BLAST 17.522879 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [77..196] Pfam 3.49485 No description for PF01486.8 was found. Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.0368771990474 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle