| Protein: | gi|29165401, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 196 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29165401, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
202.0 | [0..1] | [196..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MGRRKVEIKR IENKSSRQVT FSKRRKGLIE KARQLSILCE SSIAVVAVSG SGKLYDSASG 60
61 DNMSKIIDRY EIHHAD
|
| Detection Method: |  |
| Confidence: | 17.522879 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [77-196] |
1 11 21 31 41 51
| | | | | |
1 ELKALDLAEK IRNYLPHKEL LEIVQSKLEE SNVDNVSVDS LISMEEQLET ALSVIRAKKT 60
61 ELMMEDMKSL QEREKLLIEE NQILASQVGK KTFLVIEGDR GMSRENGSGN KVPETLSLLK 120
121
|
| Detection Method: | |
| Confidence: | 3.49485 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.835 | N/A | N/A | a.7.1 | Spectrin repeat |
