Protein Overview: SEN22_ARATH

General Information:
Name(s) found:	SEN22_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|8885574\|dbj\|BAA97504.1\| tRNA intron endonuclease [Arabidopsis thaliana] [NCBI NR] gi\|75180395\|sp\|Q9LSS3.1\|SEN22_ARATH RecName: Full=tRNA-splicing endonuclease subunit Sen2-2; AltName: Full=tRNA-intron endonuclease Sen2-2; Short=AtSen2 [NCBI NR] gi\|28827218\|gb\|AAO50453.1\| putative tRNA intron endonuclease [Arabidopsis thaliana] [NCBI NR] gi\|28393426\|gb\|AAO42135.1\| putative tRNA intron endonuclease [Arabidopsis thaliana] [NCBI NR] gi\|15238643\|ref\|NP_200831.1\| SEN2 (splicing endonuclease 2); nuclease/ tRNA-intron endonuclease [Arabidopsis thaliana] [NCBI NR] tRNA-splicing endonuclease subunit Sen2-2 OS=Arabidopsis thaliana GN=SEN2 PE=2 SV=1 [Swiss-Prot] (Q9LSS3) tRNA intron endonuclease [athaliana3702.FASTAC.txt] tRNA intron endonuclease [Arabidopsis thaliana]gi\|28827218\|gb\|AAO50453.1\| putative tRNA intron endonuclease [Arabidopsis thaliana]gi\|28393426\|gb\|AAO42135.1\| putative tRNA intron endonuclease [Arabidopsis thaliana]gi\|15238643\|ref\|NP_200831.1\| tRNA-splic [nrdb_11152004_Chlamydomonas] Tax_Id=3702 tRNA-splicing endonuclease subunit Sen2-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: ATSEN2, SEN2 \| SEN2 (SPLICING ENDONUCLEASE 2); tRNA-intron endonuclease \| chr5:24267411-24268163 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] tRNA-splicing endonuclease subunit Sen2-2 (AtSen2) (tRNA-intron endonuclease Sen2-2) [nr-271106-contam.fasta] SEN2 (SPLICING ENDONUCLEASE 2); tRNA-intron endonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta] putative tRNA intron endonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta] tRNA intron endonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: SEN2, ATSEN2 \| splicing endonuclease 2 \| chr5:24250185-24250937 REVERSE LENGTH=250 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	250 amino acids
Gene Ontology:
Cellular Component:	tRNA-intron endonuclease complex [IEA][ISS]
Biological Process:	tRNA splicing, via endonucleolytic cleavage and ligation [ISS]
Molecular Function:	nuclease activity [ISS] tRNA-intron endonuclease activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRWKWKGA EAKALAEPIS KSVSELQLSL AETESSGTLS SCNVLLAVEP EQAELLDRCC  60
   61 FGRLVLSAEK IKKWIQLSFE EAFFLHYNLK CIKISLQGRC LENEVDTWLY MKSKRPNFPM 120
  121 FFKAYSHLRS KNWVLRSGLQ YGVDFVAYRH HPSLVHSEYS VLVQSGDSDR LRVWSDIHCA 180
  181 VRLSGSVAKT LLTLYVNGNF KGEDVNLLVC LENFTVEEQT ISRWSPELSR EDQSTNSKQH 240
  241 VPNVSNLNTL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..250]	PSI-BLAST	38.30103	tRNA splicing endonuclease, C-terminal domain; tRNA splicing endonuclease EdnA, N-terminal domain

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: SEN22_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: