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Protein Overview: SEN22_ARATH

General Information:
Name(s) found: SEN22_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • tRNA-splicing endonuclease subunit Sen2-2 OS=Arabidopsis thaliana GN=SEN2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: tRNA-intron endonuclease complex [IEA][ISS]
    Biological Process: tRNA splicing, via endonucleolytic cleavage and ligation [ISS]
    Molecular Function: nuclease activity [ISS]
    tRNA-intron endonuclease activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRWKWKGA EAKALAEPIS KSVSELQLSL AETESSGTLS SCNVLLAVEP EQAELLDRCC  60
   61 FGRLVLSAEK IKKWIQLSFE EAFFLHYNLK CIKISLQGRC LENEVDTWLY MKSKRPNFPM 120
  121 FFKAYSHLRS KNWVLRSGLQ YGVDFVAYRH HPSLVHSEYS VLVQSGDSDR LRVWSDIHCA 180
  181 VRLSGSVAKT LLTLYVNGNF KGEDVNLLVC LENFTVEEQT ISRWSPELSR EDQSTNSKQH 240
  241 VPNVSNLNTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 38.30103 tRNA splicing endonuclease, C-terminal domain; tRNA splicing endonuclease EdnA, N-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle