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Protein Overview: gi|29029100, gi|...

General Information:
Name(s) found: gi|7446168 [NCBI NR]
gi|41619504 [NCBI NR]
gi|29029100 [NCBI NR]
gi|2827708 [NCBI NR]
gi|15239158 [NCBI NR]
gi|110743165 [NCBI NR]
gi|10177337 [NCBI NR]
Description(s) found:
Found 18 descriptions.
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  • pir||T05891 myb-related protein homolog F6H11.100 - Arabidopsis thaliana [NCBI NR]
  • gi|41619504|gb|AAS10117.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|29029100|gb|AAO64929.1| At5g65790 [Arabidopsis thaliana] [NCBI NR]
  • gi|2827708|emb|CAA16681.1| myb - related protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15239158|ref|NP_201380.1| MYB68 (MYB DOMAIN PROTEIN 68); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|110743165|dbj|BAE99474.1| transcription factor like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177337|dbj|BAB10686.1| transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to gibberellin stimulus [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to salicylic acid stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN  60
   61 YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLNK 120
  121 QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP 180
  181 LGMMEPTSCN YYQTTPSCNL EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS 240
  241 QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI 300
  301 NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV 360
  361 NSEDASYFNA PNHV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] PSI-BLAST 40.221849 c-Myb, DNA-binding domain
    2 View Details [196..374] MSA 3.446984 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle