Protein Overview: AZF1_ARATH

General Information:
Name(s) found:	AZF1_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9758444\|dbj\|BAB09030.1\| Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana] [NCBI NR] gi\|6009887\|dbj\|BAA85108.1\| Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana] [NCBI NR] gi\|27765016\|gb\|AAO23629.1\| At5g67450 [Arabidopsis thaliana] [NCBI NR] gi\|27461508\|gb\|AAM78034.1\| zinc finger protein OZAKGYO [Arabidopsis thaliana] [NCBI NR] gi\|15240742\|ref\|NP_201546.1\| AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding [Arabidopsis thaliana] [NCBI NR] gi\|110743426\|dbj\|BAE99599.1\| Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana] [NCBI NR] Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1 [Swiss-Prot] (Q9SSW1) CYS2/HIS2-type zinc finger protein 1 (Zinc finger protein OZAKGYO) (At5g67450) (Fragment) [athaliana3702.FASTAC.txt] Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana]gi\|9758444\|dbj\|BAB09030.1\| Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana]gi\|27765016\|gb\|AAO23629.1\| At5g67450 [Arabidopsis thaliana]gi\|27461508\|gb\|AAM78034.1\| zinc finger protein O [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Zinc finger (C2H2 type) protein 1 (AZF1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: AZF1 \| AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding \| chr5:26936368-26937105 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana] [nr-271106-contam.fasta] AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta] zinc finger protein OZAKGYO [Arabidopsis thaliana] [nr-271106-contam.fasta] At5g67450 [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: AZF1, ZF1 \| zinc-finger protein 1 \| chr5:26919142-26919879 REVERSE LENGTH=245 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	245 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA][ISS]
Biological Process:	response to cold [IEP] hyperosmotic salinity response [IEP] response to chitin [IEP]
Molecular Function:	nucleic acid binding [ISS] DNA binding [ISS] zinc ion binding [ISS] transcription factor activity [ISS] transcription repressor activity [IDA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE  60
   61 EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT VCGKSFSSYQ ALGGHKTSHR 120
  121 KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG 180
  181 GHKRCHYDGG NNGNGNGSSS NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV 240
  241 SVTTS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..58]	MSA	1.252989	View MSA. No confident structure predictions are available.
2	View Details	[59..245]	PSI-BLAST	57.221849	No description for 2i13A was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: AZF1_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: