YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|79313325, gi|...

General Information:
Name(s) found: gi|79313325 [NCBI NR]
gi|42565113 [NCBI NR]
gi|28827622 [NCBI NR]
gi|28393360 [NCBI NR]
gi|11994740 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|79313325|ref|NP_001030742.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42565113|ref|NP_188861.2| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28827622|gb|AAO50655.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393360|gb|AAO42104.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994740|dbj|BAB03069.1| transposase-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 761 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: DNA binding [IEA]
    protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDLEPVAL TPQKQDSAWK HCEVYKYGDR VQMRCLYCRK MFKGGGITRV KEHLAGKKGQ  60
   61 GTICDQVPDE VRLFLQQCID GTVRRQRKRR KSSPEPLPIA YFPPCEVETQ VAASSDVNNG 120
  121 FKSPSSDVVV GQSTGRTKQR TYRSRKNNAF ERNDLANVEV DRDMDNLIPV AISSVKNIVH 180
  181 PTSKEREKTV HMAMGRFLFD IGADFDAANS VNVQPFIDAI VSGGFGVSIP THEDLRGWIL 240
  241 KSCVEEVKKE IDECKTLWKR TGCSVLVQEL NSNEGPLILK FLVYCPEKVV FLKSVDASEI 300
  301 LDSEDKLYEL LKEVVEEIGD TNVVQVITKC EDHYAAAGKK LMDVYPSLYW VPCAAHCIDK 360
  361 MLEEFGKMDW IREIIEQART VTRIIYNHSG VLNLMRKFTF GNDIVQPVCT SSATNFTTMG 420
  421 RIADLKPYLQ AMVTSSEWND CSYSKEAGGL AMTETINDED FWKALTLANH ITAPILRVLR 480
  481 IVCSERKPAM GYVYAAMYRA KEAIKTNLAH REEYIVYWKI IDRWWLQQPL YAAGFYLNPK 540
  541 FFYSIDEEMR SEIHLAVVDC IEKLVPDVNI QDIVIKDINS YKNAVGIFGR NLAIRARDTM 600
  601 LPAEWWSTYG ESCLNLSRFA IRILSQTCSS SIGSVRNLTS ISQIYESKNS IERQRLNDLV 660
  661 FVQYNMRLRR IGSESSGDDT VDPLSHSNME VLEDWVSRNQ VCIEGNGSSD WKSLEFIKRS 720
  721 EEVAVVIDET EDLGSGFDDA EIFKGEKEAS YEGGYSENLF T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] FFAS03 1.11 The structure of the zinc finger from the human spliceosomal protein U1C
    2 View Details [91..149] deduced N/A No confident structure predictions are available.
    3 View Details [150..677] PSI-BLAST 37.69897 Three-dimensional structure of the Hermes DNA transposase
    4 View Details [678..761] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle