| Protein: | gi|79313325, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 761 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79313325, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
468.0 | [0..1] | [761..1] |
|
|
391.0 | [0..14] | [729..127] |
|
|
382.0 | [0..8] | [758..25] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MDSDLEPVAL TPQKQDSAWK HCEVYKYGDR VQMRCLYCRK MFKGGGITRV KEHLAGKKGQ 60
61 GTICDQVPDE VRLFLQQCID GTVRRQRKRR
|
| Detection Method: |  |
| Confidence: | 1.11 |
| Match: | 1uw2A |
| Description: | The structure of the zinc finger from the human spliceosomal protein U1C |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [91-149] |
1 11 21 31 41 51
| | | | | |
1 KSSPEPLPIA YFPPCEVETQ VAASSDVNNG FKSPSSDVVV GQSTGRTKQR TYRSRKNNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [150-677] |
1 11 21 31 41 51
| | | | | |
1 FERNDLANVE VDRDMDNLIP VAISSVKNIV HPTSKEREKT VHMAMGRFLF DIGADFDAAN 60
61 SVNVQPFIDA IVSGGFGVSI PTHEDLRGWI LKSCVEEVKK EIDECKTLWK RTGCSVLVQE 120
121 LNSNEGPLIL KFLVYCPEKV VFLKSVDASE ILDSEDKLYE LLKEVVEEIG DTNVVQVITK 180
181 CEDHYAAAGK KLMDVYPSLY WVPCAAHCID KMLEEFGKMD WIREIIEQAR TVTRIIYNHS 240
241 GVLNLMRKFT FGNDIVQPVC TSSATNFTTM GRIADLKPYL QAMVTSSEWN DCSYSKEAGG 300
301 LAMTETINDE DFWKALTLAN HITAPILRVL RIVCSERKPA MGYVYAAMYR AKEAIKTNLA 360
361 HREEYIVYWK IIDRWWLQQP LYAAGFYLNP KFFYSIDEEM RSEIHLAVVD CIEKLVPDVN 420
421 IQDIVIKDIN SYKNAVGIFG RNLAIRARDT MLPAEWWSTY GESCLNLSRF AIRILSQTCS 480
481 SSIGSVRNLT SISQIYESKN SIERQRLNDL VFVQYNMRLR RIGSESSG
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [678-761] |
1 11 21 31 41 51
| | | | | |
1 DDTVDPLSHS NMEVLEDWVS RNQVCIEGNG SSDWKSLEFI KRSEEVAVVI DETEDLGSGF 60
61 DDAEIFKGEK EASYEGGYSE NLFT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
