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Protein Overview: gi|30023648, gi|...

General Information:
Name(s) found: gi|9758324 [NCBI NR]
gi|30023648 [NCBI NR]
gi|28058747 [NCBI NR]
gi|22327916 [NCBI NR]
gi|110742530 [NCBI NR]
Description(s) found:
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  • gi|9758324|dbj|BAB08798.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|30023648|gb|AAP13357.1| At5g57625 [Arabidopsis thaliana] [NCBI NR]
  • gi|28058747|gb|AAO29948.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22327916|ref|NP_680450.1| allergen V5/Tpx-1-related family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110742530|dbj|BAE99181.1| pathogenesis-related protein - like [Arabidopsis thaliana] [NCBI NR]
  • (Q9FKL1) Similarity to pathogenesis-related protein (Hypothetical protein) (At5g57625) [athaliana3702.FASTAC.txt]
  • At5g57625 [Arabidopsis thaliana]gi|9758324|dbj|BAB08798.1| unnamed protein product [Arabidopsis thaliana]gi|28058747|gb|AAO29948.1| Unknown protein [Arabidopsis thaliana]gi|22327916|ref|NP_680450.1| allergen V5/Tpx-1-related family protein [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Allergen V5/Tpx-1-related family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | allergen V5/Tpx-1-related family protein | chr5:23355091-23355803 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pathogenesis-related protein - like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g57625 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr5:23337865-23338577 FORWARD LENGTH=207 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g57625 OS=Arabidopsis thaliana GN=At5g57625 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    extracellular region [IEA][ISS]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTSSTKQV IVFTISLLLV AFQAVHADYY RQRPPVTPTP YVPKPRYPLP SPSPKPVYRP  60
   61 PTTPSLPAGS IARLFLDPHN ALRSGLGLPP LIWDGKLASY ATWWANQRRY DCSLTHSTGP 120
  121 YGENLFWGSG SSWAPGFAVQ SWIVEGRSYN HNTNSCDGSG MCGHYTQMVW RDTKRLGCAR 180
  181 VVCENGAGVF ITCNYDPPGN YVGEKPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] PSI-BLAST 39.0 P14A, NMR, 20 STRUCTURES


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle