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Protein Overview: gi|7572920, gi|1...

General Information:
Name(s) found: gi|7572920 [NCBI NR]
gi|28466843 [NCBI NR]
gi|15228867 [NCBI NR]
gi|11281188 [NCBI NR]
gi|110736048 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|7572920|emb|CAB87421.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28466843|gb|AAO44030.1| At3g56220 [Arabidopsis thaliana] [NCBI NR]
  • gi|15228867|ref|NP_191181.1| transcription regulator [Arabidopsis thaliana] [NCBI NR]
  • pir||T47739 hypothetical protein F18O21.180 - Arabidopsis thaliana [NCBI NR]
  • gi|110736048|dbj|BAE99996.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 156 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription [IEA]
    Molecular Function: transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSREHKRGS SLREKFHLLR SITDSHAESE TSIIVDASKY IKKLKQKVEK INNATTSEQS  60
   61 FRESSDPNPM VTVETLEKGF MIKVMSRKNE AGMLVCVLET FEDLGLDVVE ARVSCTDTFS 120
  121 LHAIGSSNND DGDCIDAEAV KQAVAEAIRT WSDSHA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 6.39794 SREBP-1a
    2 View Details [87..156] FFAS03 1.36 No description for 2nyiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle