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Protein Overview: gi|8388621, gi|7...

General Information:
Name(s) found: gi|8388621 [NCBI NR]
gi|79315898 [NCBI NR]
gi|28416559 [NCBI NR]
gi|15233028 [NCBI NR]
gi|11357209 [NCBI NR]
gi|110742877 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|8388621|emb|CAB94141.1| CaLB protein [Arabidopsis thaliana] [NCBI NR]
  • gi|79315898|ref|NP_001030908.1| NTMC2T4; lipid binding [Arabidopsis thaliana] [NCBI NR]
  • gi|28416559|gb|AAO42810.1| At3g61050 [Arabidopsis thaliana] [NCBI NR]
  • gi|15233028|ref|NP_191664.1| NTMC2T4; lipid binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T50526 CaLB protein - Arabidopsis thaliana [NCBI NR]
  • gi|110742877|dbj|BAE99336.1| CaLB protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: lipid binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ  60
   61 WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL EDYRPPGITS LKFSKLTLGN 120
  121 VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF 180
  181 QLADEIPCIS AVVVALLAEP KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP 240
  241 HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT 300
  301 KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL 360
  361 ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL EDEKKIMEER KRLKEAGVIG 420
  421 STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM 480
  481 GRTITGQSSK RSGSSTPVNT VPENDGAKQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] MSA 1.171995 View MSA. No confident structure predictions are available.
    2 View Details [118..371] PSI-BLAST 23.522879 Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
    3 View Details [372..510] PSI-BLAST 43.30103 Synaptogamin I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.693222330136336 bayes_pls_golite062009
  • hydrolase activity
    		•  0.17768980721334 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.05056572092175 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.0304825793447705 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.01534375493934 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle