YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|25285709, gi|...

General Information:
Name(s) found: gi|5080789 [NCBI NR]
gi|28973391 [NCBI NR]
gi|26451604 [NCBI NR]
gi|25285709 [NCBI NR]
gi|15223096 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|5080789|gb|AAD39299.1|AC007576_22 Very similar to adventitious rooting related oxygenase [Arabidopsis thaliana] [NCBI NR]
  • gi|28973391|gb|AAO64020.1| putative dioxygenase [Arabidopsis thaliana] [NCBI NR]
  • gi|26451604|dbj|BAC42899.1| putative dioxygenase [Arabidopsis thaliana] [NCBI NR]
  • pir||G86274 hypothetical protein F7A19.21 - Arabidopsis thaliana [NCBI NR]
  • gi|15223096|ref|NP_172865.1| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELNGVIIP TIDLEEVSDK ILNQKIREAS ERWGCFRVIN HGVSLSLMAE MKKTVIDLFQ  60
   61 RPYEVKVRNT DVLLGSGYRA PNEINPYYEA LGLYDMASPH AVNTFCDQLE ASADQREIMV 120
  121 KYAKAINGLA TDLARKLAES YGLVETDFFK EWPSQFRINK YHFKPETVGK LGVQLHTDSG 180
  181 FLTILQDDEN VGGLEAMDNS SGTFFPIDPL PNTLAINLGD MATIWSNGRL CNVKHRVQCK 240
  241 EATMRYSIAS FLLGPMDTDL EPPSEFVDAE HPRLYKPISH EGVRNIRMTK KLHDGEALKL 300
  301 ITHAGLDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..308] PSI-BLAST 90.69897 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.29176034651701 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.188497825387454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle