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View Structure Prediction Details

Protein: gi|25285709, gi|...
Organism: Arabidopsis thaliana
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25285709, gi|....

Description E-value Query
Range
Subject
Range
gi|73761685 - gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum]
339.0 [0..6] [303..2]

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Predicted Domain #1
Region A:
Residues: [1-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELNGVIIP TIDLEEVSDK ILNQKIREAS ERWGCFRVIN HGVSLSLMAE MKKTVIDLFQ  60
   61 RPYEVKVRNT DVLLGSGYRA PNEINPYYEA LGLYDMASPH AVNTFCDQLE ASADQREIMV 120
  121 KYAKAINGLA TDLARKLAES YGLVETDFFK EWPSQFRINK YHFKPETVGK LGVQLHTDSG 180
  181 FLTILQDDEN VGGLEAMDNS SGTFFPIDPL PNTLAINLGD MATIWSNGRL CNVKHRVQCK 240
  241 EATMRYSIAS FLLGPMDTDL EPPSEFVDAE HPRLYKPISH EGVRNIRMTK KLHDGEALKL 300
  301 ITHAGLDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle