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Protein Overview: gi|25363711, gi|...

General Information:
Name(s) found: gi|4371291 [NCBI NR]
gi|28827662 [NCBI NR]
gi|26450021 [NCBI NR]
gi|25363711 [NCBI NR]
gi|15228086 [NCBI NR]
Description(s) found:
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  • gi|4371291|gb|AAD18149.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28827662|gb|AAO50675.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26450021|dbj|BAC42131.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||E84788 hypothetical protein At2g37100 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15228086|ref|NP_181247.1| protamine P1 family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZQC7) At2g37100 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|28827662|gb|AAO50675.1| unknown protein [Arabidopsis thaliana]gi|4371291|gb|AAD18149.1| hypothetical protein [Arabidopsis thaliana]gi|25363711|pir||E84788 hypothetical protein At2g37100 [imported] - Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protamine P1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protamine P1 family protein | chr2:15598226-15599119 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | protamine P1 family protein | chr2:15591147-15592040 FORWARD LENGTH=297 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protamine P1 family protein OS=Arabidopsis thaliana GN=At2g37100 PE=2 SV=1 [ARATH-contam.fasta]
  • Protamine P1 family protein OS=Arabidopsis thaliana GN=At2g37100 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: chromosome organization [ISS]
    Molecular Function: DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSSSRPVS SPGRTENPPL LMRFLRTKSR SRSRSRSRRP IFFRRKNASA AAETQEPTSP  60
   61 KVTCMGQVRI NRSKKPKPET ARVSGGATER RRQSRRCGWV KNAFPCHSFT GIIKPTCFSP 120
  121 VWRKWKSFSH ASFSKKSEKR SSSSRSEPIF GRSTVEPEEP EETRKEENQE EEASSCKSFT 180
  181 ATPPRNAFLL TRCRSAPYRS PSSANSLFED QEETNKAPFQ RHASSENVSV SEEPKTSVTE 240
  241 TTERLEDSRR ESAASEEPKR SVLGSPRQCL ILTRCNSEPA RLVPEMGYRQ NPRLGFT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] deduced N/A No confident structure predictions are available.
    2 View Details [152..297] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle