YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25363711, gi\|...
Organism:	Arabidopsis thaliana
Length:	297 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25363711, gi|....

Description	E-value	Query Range	Subject Range
gi\|7413588, gi\|1... - gi\|9757763\|dbj\|BAB08372.1\| unnamed protein product [Arabidopsis thaliana], gi\|7413588\|emb\|CAB86078.1...	332.0	[0..5]	[286..4]

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Predicted Domain #1

Region A:
Residues: [1-151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSSSRPVS SPGRTENPPL LMRFLRTKSR SRSRSRSRRP IFFRRKNASA AAETQEPTSP  60
   61 KVTCMGQVRI NRSKKPKPET ARVSGGATER RRQSRRCGWV KNAFPCHSFT GIIKPTCFSP 120
  121 VWRKWKSFSH ASFSKKSEKR SSSSRSEPIF G

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [152-297]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSTVEPEEPE ETRKEENQEE EASSCKSFTA TPPRNAFLLT RCRSAPYRSP SSANSLFEDQ  60
   61 EETNKAPFQR HASSENVSVS EEPKTSVTET TERLEDSRRE SAASEEPKRS VLGSPRQCLI 120
  121 LTRCNSEPAR LVPEMGYRQN PRLGFT