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Protein Overview: Y1259_ARATH

General Information:
Name(s) found: Y1259_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75207555|sp|Q9SSR1.1|Y1259_ARATH RecName: Full=DCC family protein At1g52590, chloroplastic; Flags: Precursor [NCBI NR]
  • gi|5903046|gb|AAD55605.1|AC008016_15 F6D8.19 [Arabidopsis thaliana] [NCBI NR]
  • gi|28827528|gb|AAO50608.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26450069|dbj|BAC42154.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F96566 F6D8.19 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18404093|ref|NP_564611.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590 PE=2 SV=1 [Swiss-Prot]
  • (Q9SSR1) F6D8.19 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|28827528|gb|AAO50608.1| unknown protein [Arabidopsis thaliana]gi|5903046|gb|AAD55605.1| F6D8.19 [Arabidopsis thaliana]gi|25405573|pir||F96566 F6D8.19 [imported] - Arabidopsis thalianagi|18404093|ref|NP_564611.1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | Identical to DCC family protein At1g52590, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SSR1;GB:Q8L9T1); similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G24090.1); similar to unnamed protein product [Vitis [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • F6D8.19 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Identical to DCC family protein At1g52590, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SSR1;GB:Q8L9T1); similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G24090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62758.1); contains InterPro domain Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263) | chr1:19592893-19593900 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Putative thiol-disulphide oxidoreductase DCC | chr1:19589224-19590231 REVERSE LENGTH=172 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 172 amino acids

    Gene Ontology:
    Cellular Component: plastoglobule [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILIPASFG RLTITSRAQV RVRVSASANQ RTIRRDSVDW VKETSSFFEE DKRPIMLFDG  60
   61 VCNLCNGGVK FVRDHDRNRS IRFEALQSEA GKKLLLRSGR APDDISSVVL VENDRSYIKS 120
  121 EAVLKIMKYI DLPFPQLAFF LQFAPLFVRD FLYENVANNR YAMFGRSDSC EL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] FFAS03 0.97 Crystal structure of Plasmodium yoelii thioredoxin-like protein 4A (DIM1)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle