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Protein Overview: gi|26453020, gi|...

General Information:
Name(s) found: gi|7320717 [NCBI NR]
gi|28973355 [NCBI NR]
gi|26453020 [NCBI NR]
gi|21536897 [NCBI NR]
gi|15240968 [NCBI NR]
gi|11277166 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|7320717|emb|CAB81922.1| heat shock protein 40-like [Arabidopsis thaliana] [NCBI NR]
  • gi|28973355|gb|AAO64002.1| putative heat shock protein 40 [Arabidopsis thaliana] [NCBI NR]
  • gi|26453020|dbj|BAC43586.1| putative heat shock protein 40 [Arabidopsis thaliana] [NCBI NR]
  • gi|21536897|gb|AAM61229.1| heat shock protein 40-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15240968|ref|NP_195759.1| DNAJ heat shock protein, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T48161 heat shock protein 40-like - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 335 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVDFYKVLE VDRSANDDEL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYDVLSDP  60
   61 QKRAIYEQYG EEGLNQAPPP GAGGGYPGGS DAGASFRFNP RSADDIFSEF FGFTRPSFGT 120
  121 GSDSRAGPSG FRYGDDIFAS FRAATTGGEA SIPSRKSAPI ERQLPCSLED LYKGVSKKMK 180
  181 ISRDVLDSSG RPTPVEEILT IEIKPGWKKG TKITFLEKGN EHRGVIPSDL VFIVDEKPHP 240
  241 VFKRDGNDLV VMQKISLVDA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP 300
  301 KDPSRKGNLR IRFIIKFPSK LTTEQKSGIK RMLSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 21.69897 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    2 View Details [93..158] PSI-BLAST 5.69897 Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
    3 View Details [159..335] PSI-BLAST 39.0 No description for 2q2gA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  5.16965422989143 bayes_pls_golite062009
  • chaperone binding
    		•  2.86745334638583 bayes_pls_golite062009
  • protein binding
    		•  2.65982681685488 bayes_pls_golite062009
  • binding
    		•  2.63138872417193 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.91297632253219 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.6342534817623 bayes_pls_golite062009
  • DNA binding
    		•  1.55234338199368 bayes_pls_golite062009
  • transporter activity
    		•  0.563782869756263 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • transferase activity
    		•  0.240656521918556 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • receptor binding
    		•  0.0658139321670459 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0276971914937192 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle