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Protein Overview: gi|15229489, gi|...

General Information:
Name(s) found: gi|9294523 [NCBI NR]
gi|28827624 [NCBI NR]
gi|27754566 [NCBI NR]
gi|15229489 [NCBI NR]
Description(s) found:
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  • gi|9294523|dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] [NCBI NR]
  • gi|28827624|gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27754566|gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229489|ref|NP_189008.1| transport protein, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9LUG1) Protein transport protein Sec23 (Putative transport protein) [athaliana3702.FASTAC.txt]
  • protein transport protein Sec23 [Arabidopsis thaliana]gi|28827624|gb|AAO50656.1| putative transport protein [Arabidopsis thaliana]gi|27754566|gb|AAO22730.1| putative transport protein [Arabidopsis thaliana]gi|15229489|ref|NP_189008.1| transport protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transport protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | transport protein, putative | chr3:8513673-8517736 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein binding / transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transport protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • protein transport protein Sec23 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Sec23/Sec24 protein transport family protein | chr3:8513666-8517729 REVERSE LENGTH=765 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protein transport protein SEC23 OS=Arabidopsis thaliana GN=At3g23660 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4J462, Protein transport protein Sec23 OS=Arabidopsis thaliana GN=At3g23660 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 765 amino acids

    Gene Ontology:
    Cellular Component: COPII vesicle coat [IEA]
    Biological Process: ER to Golgi vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    transport [ISS]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETANTDLE GIDGVRMTWN VWPHSKAEAS KCVIPLAACI SPIRRHADIP TLPYAPLRCR  60
   61 TCSAALNAYA QVDFTAKLWI CPFCYQRNHF PPHYHVISET NLPGELYPQY TTVEYTLPPP 120
  121 VANGEGLVDP PVFVFVLDTC MIEEELDFAK SALKQAIGLL PENALVGFVS FGTQAHVHEL 180
  181 GFSEMSKVFV FKGDKEISKD QILDQLGLGG SSRRGGSKGP QNGFPSSGLN RFLLPASECE 240
  241 FTLNSLLDEL QSDQWPVKPG HRSQRCTGVA LSVAAGLLGA CLPGTGARIV ALIGGPCTEG 300
  301 PGTIVSKDLS DPVRSHKDLD KDAAPYYKKA VKFYDSIAKQ LVTQGHVLDL FASALDQVGV 360
  361 AEMKVAVERT GGLVVLSESF GHSVFKDSFK RVFEDGDQAL GLCFNGTLEI CCSQDIKIQG 420
  421 AIGPCSSLEK KGASVADTVI GEGNTSAWRL CGLDKTTCLT IFFDISSSGS NTPGAANPQF 480
  481 YLQFLTSYQN PEGQTLLRVT TVCRQWIDSA VSSEELVQGF DQETAAVVMA RLASLKMESE 540
  541 EGFDATRWLD RNLIRLCSKF GDYRKDDPAS FTLNPYFSLF PQFIFNLRRS QFVQVFNNSP 600
  601 DETAYFCMLL NRENISNATV MIQPSLTTYS FNSPAEPALL DVASIAADRI LLLDAYFSVV 660
  661 VFHGMTIAQW RNMGYHHQPE HQAFAELLQA PQEDSQMIVR ERFPVPRLVV CDQHGSQARF 720
  721 LLAKLNPSAT YNNANEMSTG SDVIFTDDVS LQVFFEHLQK LVVQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..765] PSI-BLAST 1000.0 No description for 2nupA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle