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View Structure Prediction Details

Protein: gi|15229489, gi|...
Organism: Arabidopsis thaliana
Length: 765 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229489, gi|....

Description E-value Query
Range
Subject
Range
gi|73991096, gi|... - gi|73991096|ref|XP_857053.1| PREDICTED: similar to Sec23 (S. cerevisiae) homolog B isoform 10 [Canis...
950.0 [0..1] [765..1]

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Predicted Domain #1
Region A:
Residues: [1-765]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETANTDLE GIDGVRMTWN VWPHSKAEAS KCVIPLAACI SPIRRHADIP TLPYAPLRCR  60
   61 TCSAALNAYA QVDFTAKLWI CPFCYQRNHF PPHYHVISET NLPGELYPQY TTVEYTLPPP 120
  121 VANGEGLVDP PVFVFVLDTC MIEEELDFAK SALKQAIGLL PENALVGFVS FGTQAHVHEL 180
  181 GFSEMSKVFV FKGDKEISKD QILDQLGLGG SSRRGGSKGP QNGFPSSGLN RFLLPASECE 240
  241 FTLNSLLDEL QSDQWPVKPG HRSQRCTGVA LSVAAGLLGA CLPGTGARIV ALIGGPCTEG 300
  301 PGTIVSKDLS DPVRSHKDLD KDAAPYYKKA VKFYDSIAKQ LVTQGHVLDL FASALDQVGV 360
  361 AEMKVAVERT GGLVVLSESF GHSVFKDSFK RVFEDGDQAL GLCFNGTLEI CCSQDIKIQG 420
  421 AIGPCSSLEK KGASVADTVI GEGNTSAWRL CGLDKTTCLT IFFDISSSGS NTPGAANPQF 480
  481 YLQFLTSYQN PEGQTLLRVT TVCRQWIDSA VSSEELVQGF DQETAAVVMA RLASLKMESE 540
  541 EGFDATRWLD RNLIRLCSKF GDYRKDDPAS FTLNPYFSLF PQFIFNLRRS QFVQVFNNSP 600
  601 DETAYFCMLL NRENISNATV MIQPSLTTYS FNSPAEPALL DVASIAADRI LLLDAYFSVV 660
  661 VFHGMTIAQW RNMGYHHQPE HQAFAELLQA PQEDSQMIVR ERFPVPRLVV CDQHGSQARF 720
  721 LLAKLNPSAT YNNANEMSTG SDVIFTDDVS LQVFFEHLQK LVVQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2nupA
Description: No description for 2nupA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle