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Protein Overview: CHI_ARATH

General Information:
Name(s) found: CHI_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|28059661|gb|AAO30080.1| endochitinase isolog [Arabidopsis thaliana] [NCBI NR]
  • pir||G84867 probable endochitinase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2281113|gb|AAB64049.1| endochitinase isolog [Arabidopsis thaliana] [NCBI NR]
  • gi|20466688|gb|AAM20661.1| endochitinase isolog [Arabidopsis thaliana] [NCBI NR]
  • gi|20196865|gb|AAM14808.1| endochitinase isolog [Arabidopsis thaliana] [NCBI NR]
  • gi|15224308|ref|NP_181885.1| chitinase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110740521|dbj|BAE98366.1| putative endochitinase [Arabidopsis thaliana] [NCBI NR]
  • Endochitinase CHI OS=Arabidopsis thaliana GN=CHI PE=2 SV=1 [Swiss-Prot]
  • (O24603) Putative endochitinase (Endochitinase isolog) [athaliana3702.FASTAC.txt]
  • endochitinase isolog [Arabidopsis thaliana]gi|28059661|gb|AAO30080.1| endochitinase isolog [Arabidopsis thaliana]gi|20196865|gb|AAM14808.1| endochitinase isolog [Arabidopsis thaliana]gi|2281113|gb|AAB64049.1| endochitinase isolog [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Chitinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | chitinase, putative | chr2:18083466-18084512 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • endochitinase isolog [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative endochitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • chitin binding / chitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CHI | chitinase, putative | chr2:18076389-18077435 REVERSE LENGTH=277 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Chitinase class 4-like protein OS=Arabidopsis thaliana GN=CHI PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    plant-type cell wall [IDA]
    Biological Process: cell wall macromolecule catabolic process [IEA]
    Molecular Function: chitinase activity [IEA][ISS]
    chitin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPTSRNDR FALFFITLIF LILTVSKPVA SQNCGCASDF CCSKYGYCGT TDEFCGEGCQ  60
   61 AGPCRSSGGG GDPAVSLEGT VTPDFFNSIL NQRGDCPGKG FYTHDTFMAA ANSYPSFGAS 120
  121 ISKREIAAFF AHVAQETGFM CYIEEIDGPA KAASGEYCDT EKPEFPCAQG KGYYGRGAIQ 180
  181 LSWNYNYGLC GKALDENLLA SPEKVAQDQV LAFKTAFWFW TTNVRTSFKS GFGATIRAVN 240
  241 SRECSGGDST AKAANRIKYF QDYCGKLGVA PGDNLTC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 68.221849 No description for 2dkvA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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