YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHI_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPTSRNDR FALFFITLIF LILTVSKPVA SQNCGCASDF CCSKYGYCGT TDEFCGEGCQ  60
   61 AGPCRSSGGG GDPAVSLEGT VTPDFFNSIL NQRGDCPGKG FYTHDTFMAA ANSYPSFGAS 120
  121 ISKREIAAFF AHVAQETGFM CYIEEIDGPA KAASGEYCDT EKPEFPCAQG KGYYGRGAIQ 180
  181 LSWNYNYGLC GKALDENLLA SPEKVAQDQV LAFKTAFWFW TTNVRTSFKS GFGATIRAVN 240
  241 SRECSGGDST AKAANRIKYF QDYCGKLGVA PGDNLTC

Type	Start	End	Confidence
Signal Peptide	1	31	0.98
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	277	0.99