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Protein Overview: UBA2A_ARATH

General Information:
Name(s) found: UBA2A_ARATH [Swiss-Prot]
Description(s) found:
Found 27 descriptions.
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  • UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: abscisic acid mediated signaling pathway [TAS]
    mRNA stabilization [NAS]
    Molecular Function: AU-rich element binding [IDA]
    RNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE  60
   61 DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ DLLEPFSKEQ VLSLLKEAAE 120
  121 KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS 180
  181 KGYGFILYKS RSGARNALKQ PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS 240
  241 EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK 300
  301 RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH 360
  361 LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP AIGQALLGSL GTAAGVNPGN 420
  421 GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] PSI-BLAST 32.09691 Hu antigen D (Hud)
    2 View Details [135..337] PSI-BLAST 51.30103 Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI)
    3 View Details [338..478] PSI-BLAST 4.522879 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle