| Protein: | UBA2A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 478 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA2A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..7] | [478..48] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE 60
61 DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ DLLEPFSKEQ VLSLLKEAAE 120
121 KHVDVANRIR EVAD
|
| Detection Method: |  |
| Confidence: | 32.09691 |
| Match: | 1fxlA |
| Description: | Hu antigen D (Hud) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-337] |
1 11 21 31 41 51
| | | | | |
1 EDPVHRKIFV HGLGWDTKTE TLIEAFKQYG EIEDCKAVFD KISGKSKGYG FILYKSRSGA 60
61 RNALKQPQKK IGSRMTACQL ASKGPVFGGA PIAAAAVSAP AQHSNSEHTQ KKIYVSNVGA 120
121 ELDPQKLLMF FSKFGEIEEG PLGLDKYTGR PKGFCLFVYK SSESAKRALE EPHKTFEGHI 180
181 LHCQKAIDGP KPGKQQQHHH NPH
|
| Detection Method: | |
| Confidence: | 51.30103 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [338-478] |
1 11 21 31 41 51
| | | | | |
1 AYNNPRYQRN DNNGYGPPGG HGHLMAGNPA GMGGPTAQVI NPAIGQALTA LLASQGAGLA 60
61 FNPAIGQALL GSLGTAAGVN PGNGVGMPTG YGTQAMAPGT MPGYGTQPGL QGGYQTPQPG 120
121 QGGTSRGQHG VGPYGTPYMG H
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
