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Protein Overview: PP216_ARATH

General Information:
Name(s) found: PP216_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06430, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2750; Flags: Precursor [NCBI NR]
  • gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana] [NCBI NR]
  • gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230719|ref|NP_187294.1| EMB2750 (embryo defective 2750) [Arabidopsis thaliana] [NCBI NR]
  • Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1 [Swiss-Prot]
  • (Q9SQU6) F24P17.10 protein (Hypothetical protein) (At3g06430) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]gi|15230719|ref|NP_187294.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pentatricopeptide (PPR) repeat-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EMB2750 | EMB2750 (EMBRYO DEFECTIVE 2750) | chr3:1956664-1958246 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • EMB2750 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g06430 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:1956658-1958240 REVERSE LENGTH=486 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: embryonic development ending in seed dormancy [NAS]
    pollen tube development [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMSLSFSS SLCSSRIPEG KRRFRHRDVG IVRCVLAASK SSPGSVTKKR LWKDGEFPGI  60
   61 TEPVNQRRTP IKNVKKKLDR RSKANGWVNT VTETLSDLIA KKQWLQALEV FDMLREQTFY 120
  121 QPKEGTYMKL LVLLGKSGQP NRAQKLFDEM LEEGLEPTVE LYTALLAAYT RSNLIDDAFS 180
  181 ILDKMKSFPQ CQPDVFTYST LLKACVDASQ FDLVDSLYKE MDERLITPNT VTQNIVLSGY 240
  241 GRVGRFDQME KVLSDMLVST ACKPDVWTMN IILSVFGNMG KIDMMESWYE KFRNFGIEPE 300
  301 TRTFNILIGS YGKKRMYDKM SSVMEYMRKL EFPWTTSTYN NIIEAFADVG DAKNMELTFD 360
  361 QMRSEGMKAD TKTFCCLING YANAGLFHKV ISSVQLAAKF EIPENTAFYN AVISACAKAD 420
  421 DLIEMERVYI RMKERQCVCD SRTFEIMVEA YEKEGMNDKI YYLEQERQKL MDRTVATKEM 480
  481 ENLPAG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] deduced N/A No confident structure predictions are available.
    2 View Details [102..486] PSI-BLAST 33.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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