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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP216_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMSLSFSS SLCSSRIPEG KRRFRHRDVG IVRCVLAASK SSPGSVTKKR LWKDGEFPGI  60
   61 TEPVNQRRTP IKNVKKKLDR RSKANGWVNT VTETLSDLIA KKQWLQALEV FDMLREQTFY 120
  121 QPKEGTYMKL LVLLGKSGQP NRAQKLFDEM LEEGLEPTVE LYTALLAAYT RSNLIDDAFS 180
  181 ILDKMKSFPQ CQPDVFTYST LLKACVDASQ FDLVDSLYKE MDERLITPNT VTQNIVLSGY 240
  241 GRVGRFDQME KVLSDMLVST ACKPDVWTMN IILSVFGNMG KIDMMESWYE KFRNFGIEPE 300
  301 TRTFNILIGS YGKKRMYDKM SSVMEYMRKL EFPWTTSTYN NIIEAFADVG DAKNMELTFD 360
  361 QMRSEGMKAD TKTFCCLING YANAGLFHKV ISSVQLAAKF EIPENTAFYN AVISACAKAD 420
  421 DLIEMERVYI RMKERQCVCD SRTFEIMVEA YEKEGMNDKI YYLEQERQKL MDRTVATKEM 480
  481 ENLPAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle