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Protein Overview: SPL2_ARATH

General Information:
Name(s) found: SPL2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|67461550|sp|Q9S840.1|SPL2_ARATH RecName: Full=Squamosa promoter-binding-like protein 2 [NCBI NR]
  • gi|5931649|emb|CAB56578.1| squamosa promoter binding protein-like 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|5931645|emb|CAB56576.1| squamosa promoter binding protein-like 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|42573557|ref|NP_974875.1| SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|30694251|ref|NP_851122.1| SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T52603 squamosa promoter binding protein 2 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15239820|ref|NP_199141.1| SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|110740141|dbj|BAF01969.1| squamosa promoter binding protein-like 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|109134151|gb|ABG25073.1| At5g43270 [Arabidopsis thaliana] [NCBI NR]
  • gi|10177389|dbj|BAB10590.1| squamosa promoter binding protein-like 2 [Arabidopsis thaliana] [NCBI NR]
  • Squamosa promoter-binding-like protein 2 OS=Arabidopsis thaliana GN=SPL2 PE=2 SV=1 [Swiss-Prot]
  • (Q9S840) Squamosa promoter binding protein-like 2 [athaliana3702.FASTAC.txt]
  • squamosa promoter binding protein-like 2 [Arabidopsis thaliana]gi|5931649|emb|CAB56578.1| squamosa promoter binding protein-like 2 [Arabidopsis thaliana]gi|5931645|emb|CAB56576.1| squamosa promoter binding protein-like 2 [Arabidopsis thaliana]gi|254566 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Squamosa-promoter binding-like protein 2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17377755-17379371 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding | chr5:17377755-17379371 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • squamosa promoter binding protein-like 2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g43270 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Squamosa promoter-binding-like protein 2 [nr-271106-contam.fasta]
  • SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SPL2 | squamosa promoter binding protein-like 2 | chr5:17360527-17362143 REVERSE LENGTH=419 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of timing of transition from vegetative to reproductive phase [IMP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI  60
   61 AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG IDTSPSLELS FGSGDPVLGL 120
  121 KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS 180
  181 AKDYHRKHRI CENHSKFPKV VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR 240
  241 RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH 300
  301 NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL 360
  361 DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH RNGVGQFNEN YFSLNQFYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] deduced N/A No confident structure predictions are available.
    2 View Details [108..249] PSI-BLAST 38.69897 Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4
    3 View Details [250..419] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle