| Protein: | SPL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
683.0 | [0..1] | [419..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI 60
61 AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG IDTSPSL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-249] |
1 11 21 31 41 51
| | | | | |
1 ELSFGSGDPV LGLKLGKRTY FEDFWEVENA KGLGLPVTLA SSSVSPVKKS KSIPQRLQTP 60
61 HCQVEGCNLD LSSAKDYHRK HRICENHSKF PKVVVSGVER RFCQQCSRFH CLSEFDEKKR 120
121 SCRRRLSDHN ARRRKPNPGR TY
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 1ul4A |
| Description: | Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [250-419] |
1 11 21 31 41 51
| | | | | |
1 DGKPQVDFVW NRFALIHPRS EEKFIWPSSK HVPSRVLMPQ PAKTEISDTE HNRFGLLDPK 60
61 TKTARAELFS KEKVTISSHM GASQDLDGAL SLLSNSTTWV SSSDQPRRFT LDHHPSSNLQ 120
121 PVAHRSAAQL NSVSGYWQPD PPAVEGPTAL HRNGVGQFNE NYFSLNQFYN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
