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Protein Overview: DDPS1_ARATH

General Information:
Name(s) found: DDPS1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7960765|emb|CAB91841.1| dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|75223198|sp|O80458.2|DDPS1_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 1; Short=Dedol-PP synthase 1 [NCBI NR]
  • gi|6651294|gb|AAF22257.1|AF162441_1 cis-prenyltransferase homolog [Arabidopsis thaliana] [NCBI NR]
  • pir||T52648 dehydrodolichyl diphosphate synthase [validated] - Arabidopsis thaliana [NCBI NR]
  • gi|20196999|gb|AAC23756.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18400264|ref|NP_565551.1| ACPT (Arabidopsis cis-prenyltransferase); dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] [NCBI NR]
  • Dehydrodolichyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=DPS PE=1 SV=2 [Swiss-Prot]
  • (O80458) Expressed protein (Cis-prenyltransferase homolog) (Dehydrodolichyl diphosphate synthase) [athaliana3702.FASTAC.txt]
  • dehydrodolichyl diphosphate synthase [Arabidopsis thaliana]gi|20196999|gb|AAC23756.2| expressed protein [Arabidopsis thaliana]gi|6651294|gb|AAF22257.1| cis-prenyltransferase homolog [Arabidopsis thaliana]gi|25453539|pir||T52648 dehydrodolichyl diphosph [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dehydrodolichyl diphosphate synthase 1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ACPT | ACPT (ARABIDOPSIS CIS-PRENYLTRANSFERASE); dehydrodolichyl diphosphate synthase | chr2:9973327-9974821 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dehydrodolichyl diphosphate synthase 1 (Dedol-PP synthase 1) [nr-271106-contam.fasta]
  • cis-prenyltransferase homolog [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ACPT; dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ACPT, CPT | cis-prenyltransferase | chr2:9966247-9967741 REVERSE LENGTH=303 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: dolichol biosynthetic process [IGI]
    Molecular Function: dehydrodolichyl diphosphate synthase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLLSSDSS LLSLLFLFLI PCLFITSYIG FPVFLLKLIG LIKIKAARDN EKRDEGTYVV  60
   61 REDGLQRELM PRHVAFILDG NRRWAKRAGL TTSQGHEAGA KRLIDIAELC FELGVHTVSA 120
  121 FAFSTENWGR DKIEIDNLMS LIQHYRNKSN IKFFHRSEVR VSVIGNKTKI PESLLKEIHE 180
  181 IEEATKGYKN KHLIMAVDYS GKFDIMHACK SLVKKSEKGL IREEDVDEAL IERELLTNCS 240
  241 DFPSPDLMIR TSGEQRISNF FLWQLAYSEL FFSPVFWPDF DKDKLLEALA SYQRRERRFG 300
  301 CRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] PSI-BLAST 86.69897 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.331797220769091 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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