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Protein Overview: PME5_ARATH

General Information:
Name(s) found: PME5_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T02183 probable pectinesterase At2g47040 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|61213926|sp|Q5MFV8.2|PME5_ARATH RecName: Full=Pectinesterase 5; Short=PE 5; AltName: Full=Pectin methylesterase 5; Short=AtPME5; AltName: Full=Pectin methylesterase 67; Short=AtPME67; AltName: Full=Protein VANGUARD 1; Flags: Precursor [NCBI NR]
  • gi|3522958|gb|AAC34240.1| putative pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|24796998|gb|AAN64511.1| At2g47040/F14M4.13 [Arabidopsis thaliana] [NCBI NR]
  • gi|20147201|gb|AAM10316.1| At2g47040/F14M4.13 [Arabidopsis thaliana] [NCBI NR]
  • gi|15226490|ref|NP_182227.1| VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=1 SV=2 [Swiss-Prot]
  • (O80721) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) (At2g47040/F14M4.13) [athaliana3702.FASTAC.txt]
  • putative pectinesterase [Arabidopsis thaliana]gi|20147201|gb|AAM10316.1| At2g47040/F14M4.13 [Arabidopsis thaliana]gi|7447386|pir||T02183 probable pectinesterase At2g47040 [imported] - Arabidopsis thalianagi|15226490|ref|NP_182227.1| pectinesterase fami [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pectinesterase-5 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: VGD1 | VGD1 (VANGUARD1); pectinesterase | chr2:19335256-19337130 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Pectinesterase-5 precursor (Pectin methylesterase 5) (PE 5) (VANGUARD 1 protein) [nr-271106-contam.fasta]
  • putative pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g47040/F14M4.13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VGD1 | Plant invertase/pectin methylesterase inhibitor superfamily | chr2:19328186-19330060 REVERSE LENGTH=595 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 595 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IEA]
    endomembrane system [IEA]
    plant-type cell wall [ISS]
    Biological Process: pollen tube growth [TAS]
    Molecular Function: enzyme inhibitor activity [IEA]
    pectinesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGKVVVSVA SILLIVGVAI GVVAYINKNG DANLSPQMKA VRGICEATSD KASCVKTLEP  60
   61 VKSDDPNKLI KAFMLATRDA ITQSSNFTGK TEGNLGSGIS PNNKAVLDYC KKVFMYALED 120
  121 LSTIVEEMGE DLNQIGSKID QLKQWLTGVY NYQTDCLDDI EEDDLRKTIG EGIASSKILT 180
  181 SNAIDIFHTV VSAMAKLNLK VEDFKNMTGG IFAPSDKGAA PVNKGTPPVA DDSPVADPDG 240
  241 PARRLLEDID ETGIPTWVSG ADRKLMTKAG RGSNDGGARI RATFVVAKDG SGQFKTVQQA 300
  301 VNACPEKNPG RCIIHIKAGI YREQVIIPKK KNNIFMFGDG ARKTVISYNR SVKLSPGTTT 360
  361 SLSGTVQVES EGFMAKWIGF KNTAGPMGHQ AVAIRVNGDR AVIFNCRFDG YQDTLYVNNG 420
  421 RQFYRNIVVS GTVDFIFGKS ATVIQNSLIV VRKGNKGQFN TVTADGNEKG LAMKIGIVLQ 480
  481 NCRIVPDKKL AAERLIVESY LGRPWKKFST TVIINSEIGD VIRPEGWKIW DGESFHKSCR 540
  541 YVEYNNRGPG AITNRRVNWV KIARSAAEVN DFTVANWLGP INWIQEANVP VTLGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] PSI-BLAST 21.154902 Crystal structure of the complex between pectin methylesterase and its inhibitor protein
    2 View Details [203..268] deduced N/A No confident structure predictions are available.
    3 View Details [269..595] PSI-BLAST 101.0 Pectin methylesterase PemA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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