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Protein Overview: gi|4587528, gi|2...

General Information:
Name(s) found: gi|4587528 [NCBI NR]
gi|26450444 [NCBI NR]
gi|25345682 [NCBI NR]
gi|15221492 [NCBI NR]
gi|13877721 [NCBI NR]
Description(s) found:
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  • gi|4587528|gb|AAD25759.1|AC007060_17 Strong similarity to F19I3.2 gi|3033375 putative berberine bridge enzyme from Arabidopsis thaliana BAC gb|AC004238. EST gb|R90518 comes from this gene [NCBI NR]
  • gi|26450444|dbj|BAC42336.1| putative reticuline oxidase [Arabidopsis thaliana] [NCBI NR]
  • pir||G86432 hypothetical protein T5I8.17 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221492|ref|NP_174359.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13877721|gb|AAK43938.1|AF370619_1 Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SA87) T5I8.17 protein (Unknown protein) (Putative reticuline oxidase) [athaliana3702.FASTAC.txt]
  • putative reticuline oxidase [Arabidopsis thaliana]gi|13877721|gb|AAK43938.1| Unknown protein [Arabidopsis thaliana]gi|4587528|gb|AAD25759.1| Strong similarity to F19I3.2 gi|3033375 putative berberine bridge enzyme from Arabidopsis thaliana BAC gb|AC0042 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 FAD-binding domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | FAD-binding domain-containing protein | chr1:10898179-10899762 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative reticuline oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • electron carrier [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Strong similarity to F19I3.2 gi|3033375 putative berberine bridge enzyme from Arabidopsis thaliana BAC gb|AC004238. EST gb|R90518 comes from this gene [nr-271106-contam.fasta]
  • | Symbols: | FAD-binding Berberine family protein | chr1:10898197-10899780 FORWARD LENGTH=527 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • FAD-binding and BBE domain-containing protein OS=Arabidopsis thaliana GN=T5I8.17 PE=2 SV=1 [ARATH-contam.fasta]
  • FAD-binding Berberine family protein OS=Arabidopsis thaliana GN=T5I8.17 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: oxidoreductase activity [IEA]
    catalytic activity [IEA]
    FAD binding [IEA]
    electron carrier activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLLVISLL LLISTSVTTS QSVTDPIAFL RCLDRQPTDP TSPNSAVAYI PTNSSFTTVL  60
   61 RSRIPNLRFD KPTTPKPISV VAAATWTHIQ AAVGCARELS LQVRIRSGGH DFEGLSYTST 120
  121 VPFFVLDMFG FKTVDVNLTE RTAWVDSGAT LGELYYRISE KSNVLGFPAG LSTTLGVGGH 180
  181 FSGGGYGNLM RKYGLSVDNV FGSGIVDSNG NIFTDRVSMG EDRFWAIRGG GAASYGVVLG 240
  241 YKIQLVPVPE KVTVFKVGKT VGEGAVDLIM KWQSFAHSTD RNLFVRLTLT LVNGTKPGEN 300
  301 TVLATFIGMY LGRSDKLLTV MNRDFPELKL KKTDCTEMRW IDSVLFWDDY PVGTPTSVLL 360
  361 NPLVAKKLFM KRKSDYVKRL ISRTDLGLIL KKLVEVEKVK MNWNPYGGRM GEIPSSRTPF 420
  421 PHRAGNLFNI EYIIDWSEAG DNVEKKYLAL ANEFYRFMTP YVSSNPREAF LNYRDLDIGS 480
  481 SVKSTYQEGK IYGAKYFKEN FERLVDIKTT IDAENFWKNE QSIPVRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..527] PSI-BLAST 56.69897 Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle