YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PP290_ARATH

General Information:
Name(s) found: PP290_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidopsis thaliana GN=At3g60980 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 412 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to oxidative stress [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIGRLNLG RRFCTAVPRR SEDIMSNPDC RPSDLCLRVS YLIRCVGDLD TAAKYARLAV  60
   61 FTSIKSESTT TICQSIIGGM LRDKRLKDAY DLYEFFFNQH NLRPNSHCWN YIIESGFQQG 120
  121 LVNDALHFHH RCINSGQVHD YPSDDSFRIL TKGLVHSGRL DQAEAFLRGR TVNRTTYPDH 180
  181 VAYNNLIRGF LDLGNFKKAN LVLGEFKRLF LIALSETKDD LHHSNYENRV AFLMATFMEY 240
  241 WFKQGKQVEA MECYNRCVLS NRLLVCAETG NALLKVLLKY GEKKNAWALY HELLDKNGTG 300
  301 KGCLDSDTIK IMVDECFDMG WFSEAMETYK KARPKNDYLS DKYIITRFCE NRMLSEAESV 360
  361 FVDSLADDFG YIDVNTYKTM IDAYVKAGRI HDAIKTSNKM IDATLKEVSH LF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..412] PSI-BLAST 35.154902 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle