| Protein: | PP290_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 412 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP290_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..3] | [412..132] |
|
Region A: Residues: [1-412] |
1 11 21 31 41 51
| | | | | |
1 MSLIGRLNLG RRFCTAVPRR SEDIMSNPDC RPSDLCLRVS YLIRCVGDLD TAAKYARLAV 60
61 FTSIKSESTT TICQSIIGGM LRDKRLKDAY DLYEFFFNQH NLRPNSHCWN YIIESGFQQG 120
121 LVNDALHFHH RCINSGQVHD YPSDDSFRIL TKGLVHSGRL DQAEAFLRGR TVNRTTYPDH 180
181 VAYNNLIRGF LDLGNFKKAN LVLGEFKRLF LIALSETKDD LHHSNYENRV AFLMATFMEY 240
241 WFKQGKQVEA MECYNRCVLS NRLLVCAETG NALLKVLLKY GEKKNAWALY HELLDKNGTG 300
301 KGCLDSDTIK IMVDECFDMG WFSEAMETYK KARPKNDYLS DKYIITRFCE NRMLSEAESV 360
361 FVDSLADDFG YIDVNTYKTM IDAYVKAGRI HDAIKTSNKM IDATLKEVSH LF
|
| Detection Method: |  |
| Confidence: | 35.154902 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
