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Protein Overview: CPSF3_ARATH

General Information:
Name(s) found: CPSF3_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Cleavage and polyadenylation specificity factor subunit 3-I OS=Arabidopsis thaliana GN=CPSF73-I PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 693 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    mRNA cleavage and polyadenylation specificity factor complex [ISS]
    Biological Process: mRNA polyadenylation [ISS]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSTSLKR REQPISRDGD QLIVTPLGAG SEVGRSCVYM SFRGKNILFD CGIHPAYSGM  60
   61 AALPYFDEID PSSIDVLLIT HFHIDHAASL PYFLEKTTFN GRVFMTHATK AIYKLLLTDY 120
  121 VKVSKVSVED MLFDEQDINK SMDKIEVIDF HQTVEVNGIK FWCYTAGHVL GAAMFMVDIA 180
  181 GVRILYTGDY SREEDRHLRA AELPQFSPDI CIIESTSGVQ LHQSRHIREK RFTDVIHSTV 240
  241 AQGGRVLIPA FALGRAQELL LILDEYWANH PDLHNIPIYY ASPLAKKCMA VYQTYILSMN 300
  301 DRIRNQFANS NPFVFKHISP LNSIDDFNDV GPSVVMATPG GLQSGLSRQL FDSWCSDKKN 360
  361 ACIIPGYMVE GTLAKTIINE PKEVTLMNGL TAPLNMQVHY ISFSAHADYA QTSTFLKELM 420
  421 PPNIILVHGE ANEMMRLKQK LLTEFPDGNT KIMTPKNCES VEMYFNSEKL AKTIGRLAEK 480
  481 TPDVGDTVSG ILVKKGFTYQ IMAPDELHVF SQLSTATVTQ RITIPFVGAF GVIKHRLEKI 540
  541 FESVEFSTDE ESGLPALKVH ERVTVKQESE KHISLQWSSD PISDMVSDSI VALILNISRE 600
  601 VPKIVMEEED AVKSEEENGK KVEKVIYALL VSLFGDVKLG ENGKLVIRVD GNVAQLDKES 660
  661 GEVESEHSGL KERVRVAFER IQSAVKPIPL SAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 102.0 No description for 2i7tA was found.
    2 View Details [465..552] deduced N/A No confident structure predictions are available.
    3 View Details [553..693] MSA 3.218984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle