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Protein Overview: gi|9758482, gi|2...

General Information:
Name(s) found: gi|9758482 [NCBI NR]
gi|42573758 [NCBI NR]
gi|23506191 [NCBI NR]
gi|21536802 [NCBI NR]
gi|21436109 [NCBI NR]
gi|20453124 [NCBI NR]
gi|17529230 [NCBI NR]
gi|15240312 [NCBI NR]
Description(s) found:
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  • gi|9758482|dbj|BAB09011.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|42573758|ref|NP_974975.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23506191|gb|AAN31107.1| At5g61670/k11j9_190 [Arabidopsis thaliana] [NCBI NR]
  • gi|21536802|gb|AAM61134.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|21436109|gb|AAM51301.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20453124|gb|AAM19804.1| AT5g61670/k11j9_190 [Arabidopsis thaliana] [NCBI NR]
  • gi|17529230|gb|AAL38842.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15240312|ref|NP_200975.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FKF4) Genomic DNA, chromosome 5, TAC clone:K11J9 (Hypothetical protein) (AT5g61670/k11j9_190) [athaliana3702.FASTAC.txt]
  • At5g61670/k11j9_190 [Arabidopsis thaliana]gi|21436109|gb|AAM51301.1| unknown protein [Arabidopsis thaliana]gi|17529230|gb|AAL38842.1| unknown protein [Arabidopsis thaliana]gi|9758482|dbj|BAB09011.1| unnamed protein product [Arabidopsis thaliana]gi|215 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | heat shock protein binding / unfolded protein binding | chr5:24800855-24802427 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g61670/k11j9_190 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g61670/k11j9_190 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. | chr5:24783629-24785201 FORWARD LENGTH=307 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g61670/k11j9_190 OS=Arabidopsis thaliana GN=At5g61670 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 307 amino acids

    Gene Ontology:
    Cellular Component: plastid [ISS]
    Biological Process: chromoplast organization [ISS]
    carotene biosynthetic process [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLGRILSV SYPPDPYTWR FSQYKLSSSL GRNRRLRWRF TALDPESSSL DSESSADKFA  60
   61 SGFCIIEGPE TVQDFAKMQL QEIQDNIRSR RNKIFLHMEE VRRLRIQQRI KNTELGIINE 120
  121 EQEHELPNFP SFIPFLPPLT AANLKVYYAT CFSLIAGIIL FGGLLAPTLE LKLGIGGTSY 180
  181 ADFIQSLHLP MQLSQVDPIV ASFSGGAVGV ISALMVVEVN NVKQQEHKRC KYCLGTGYLA 240
  241 CARCSSTGAL VLTEPVSAIA GGNHSLSPPK TERCSNCSGA GKVMCPTCLC TGMAMASEHD 300
  301 PRIDPFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A No confident structure predictions are available.
    2 View Details [99..204] PSI-BLAST 3.39794 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [205..307] PSI-BLAST 20.0 The crystal structure of Hsp40 Ydj1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle