YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9758482, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLGRILSV SYPPDPYTWR FSQYKLSSSL GRNRRLRWRF TALDPESSSL DSESSADKFA  60
   61 SGFCIIEGPE TVQDFAKMQL QEIQDNIRSR RNKIFLHMEE VRRLRIQQRI KNTELGIINE 120
  121 EQEHELPNFP SFIPFLPPLT AANLKVYYAT CFSLIAGIIL FGGLLAPTLE LKLGIGGTSY 180
  181 ADFIQSLHLP MQLSQVDPIV ASFSGGAVGV ISALMVVEVN NVKQQEHKRC KYCLGTGYLA 240
  241 CARCSSTGAL VLTEPVSAIA GGNHSLSPPK TERCSNCSGA GKVMCPTCLC TGMAMASEHD 300
  301 PRIDPFD

Type	Start	End	Confidence
Cytoplasmic	1	145	0.97
Transmembrane Helix	146	167	0.92
Non-Cytoplasmic	168	198	0.90
Transmembrane Helix	199	219	0.92
Cytoplasmic	220	307	0.79